Protein–RNA interactions for Protein: O43508

TNFSF12, Tumor necrosis factor ligand superfamily member 12, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12O43508 Y_RNA.346-201ENST00000365385 112 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 SNORA2A-201ENST00000383885 135 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 RNU6-409P-201ENST00000384114 104 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 Y_RNA.507-201ENST00000384500 99 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 Y_RNA.525-201ENST00000384570 113 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 MIR516A2-201ENST00000384888 90 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 MIR516A1-201ENST00000385033 90 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 MT-TR-201ENST00000387439 65 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 RNA5SP193-201ENST00000410353 107 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 RNU6-1232P-201ENST00000516299 86 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 RNU1-29P-201ENST00000606574 126 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 AL162376.1-201ENST00000624117 175 ntBASIC0.13□□□□□ -2.39
TNFSF12O43508 Y_RNA.35-201ENST00000362601 101 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RNU6-1313P-201ENST00000362622 102 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RNU6-524P-201ENST00000384270 107 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RNU6-816P-201ENST00000390914 107 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 SNORD41.1-201ENST00000391000 69 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RNU6-269P-201ENST00000391077 97 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RNU6-1268P-201ENST00000391214 107 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RNU6-1239P-201ENST00000391310 107 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 MIR1287-201ENST00000408492 90 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 AL353813.1-201ENST00000440700 253 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 SPINT5P-201ENST00000448174 155 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RPL39P34-201ENST00000477141 156 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 RNU6-1006P-201ENST00000516998 103 ntBASIC0.12□□□□□ -2.39
TNFSF12O43508 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.12□□□□□ -2.39
TNFSF12O43508 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.11□□□□□ -2.39
TNFSF12O43508 RNU6-1260P-201ENST00000362944 107 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNU6-774P-201ENST00000363238 107 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 SNORD114-23-201ENST00000363536 72 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 Y_RNA.247-201ENST00000364500 92 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNA5SP128-201ENST00000365305 116 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 Y_RNA.362-201ENST00000365518 110 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 MIR518E-201ENST00000385252 88 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNA5SP299-201ENST00000391203 116 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNU6-848P-201ENST00000515948 107 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNU6-617P-201ENST00000516147 107 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNU6-473P-201ENST00000516164 107 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNU6-1049P-201ENST00000516414 107 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 MIR3133-201ENST00000583157 78 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 MIR499B-201ENST00000636498 73 ntBASIC0.11□□□□□ -2.39
TNFSF12O43508 RNA5SP436-201ENST00000516020 115 ntBASIC0.1□□□□□ -2.39
TNFSF12O43508 SNORA62.5-201ENST00000516634 120 ntBASIC0.1□□□□□ -2.39
TNFSF12O43508 SNORA70.25-201ENST00000612741 95 ntBASIC0.1□□□□□ -2.39
TNFSF12O43508 MIR6515-201ENST00000619843 57 ntBASIC0.1□□□□□ -2.39
TNFSF12O43508 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
TNFSF12O43508 SNORD38.1-201ENST00000363863 68 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 Y_RNA.323-201ENST00000365157 109 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 RNU6-127P-201ENST00000390897 107 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 MIR548G-201ENST00000408442 89 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 RNU7-13P-201ENST00000516413 62 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 RNU6-1018P-201ENST00000516577 106 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 Y_RNA.703-201ENST00000516846 111 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 MIR3920-201ENST00000581751 86 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 RNU6-90P-201ENST00000606352 106 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 AL162726.3-218ENST00000636401 95 ntBASIC0.09□□□□□ -2.4
TNFSF12O43508 Y_RNA.85-201ENST00000363014 111 ntBASIC0.08□□□□□ -2.4
TNFSF12O43508 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
TNFSF12O43508 MIR643-201ENST00000385267 97 ntBASIC0.08□□□□□ -2.4
TNFSF12O43508 RNU6-1265P-201ENST00000516342 103 ntBASIC0.08□□□□□ -2.4
TNFSF12O43508 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.08□□□□□ -2.4
TNFSF12O43508 Y_RNA.57-201ENST00000362806 113 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 Y_RNA.226-201ENST00000364337 114 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 RNU6-80P-201ENST00000384195 107 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 RNU6-1201P-201ENST00000384227 107 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 MIR598-201ENST00000384868 97 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 MIR1912-201ENST00000410389 80 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 snoU13.18-201ENST00000459483 104 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
TNFSF12O43508 SNORA42.1-201ENST00000363515 137 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 Y_RNA.218-201ENST00000364218 104 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 RNU6-1062P-201ENST00000383908 107 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 RNU6-1254P-201ENST00000391266 104 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 Y_RNA.649-201ENST00000459077 103 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 AC007012.1-201ENST00000567192 175 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 MIR5706-201ENST00000579841 80 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 AL442128.1-201ENST00000615151 90 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 AL035470.1-201ENST00000622571 220 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 MIR3914-2-201ENST00000637339 95 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 AC073869.9-201ENST00000641610 120 ntBASIC0.06□□□□□ -2.4
TNFSF12O43508 Y_RNA.71-201ENST00000362892 104 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 Y_RNA.173-201ENST00000363776 113 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 SNORD114-9-201ENST00000364370 72 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 Y_RNA.549-201ENST00000384657 102 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 MIR613-201ENST00000385248 95 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 RNU6-243P-201ENST00000391140 107 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.05□□□□□ -2.4
TNFSF12O43508 Y_RNA.712-201ENST00000517011 92 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 NAMPTP3-201ENST00000569273 224 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 AC010487.4-201ENST00000637027 61 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 MIR924-201ENST00000638017 53 ntBASIC0.05□□□□□ -2.4
TNFSF12O43508 SNORD36A-201ENST00000362874 73 ntBASIC0.04□□□□□ -2.4
TNFSF12O43508 Y_RNA.309-201ENST00000365046 111 ntBASIC0.04□□□□□ -2.4
TNFSF12O43508 RNU6-746P-201ENST00000384112 109 ntBASIC0.04□□□□□ -2.4
TNFSF12O43508 MIR548A1-201ENST00000385041 97 ntBASIC0.04□□□□□ -2.4
TNFSF12O43508 MIR501-201ENST00000390204 84 ntBASIC0.04□□□□□ -2.4
TNFSF12O43508 AL161932.1-201ENST00000437408 146 ntBASIC0.04□□□□□ -2.4
TNFSF12O43508 RNA5SP484-201ENST00000458857 111 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms