Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 Y_RNA.215-201ENST00000364204 112 ntBASIC-1.1□□□□□ -2.59
SMCO3A2RU48 RNU6-900P-201ENST00000384498 102 ntBASIC-1.1□□□□□ -2.59
SMCO3A2RU48 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.1□□□□□ -2.59
SMCO3A2RU48 AC007012.1-201ENST00000567192 175 ntBASIC-1.1□□□□□ -2.59
SMCO3A2RU48 MIR652-201ENST00000385278 98 ntBASIC-1.11□□□□□ -2.59
SMCO3A2RU48 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.11□□□□□ -2.59
SMCO3A2RU48 SNORA75.5-201ENST00000391291 81 ntBASIC-1.11□□□□□ -2.59
SMCO3A2RU48 MIR1912-201ENST00000410389 80 ntBASIC-1.11□□□□□ -2.59
SMCO3A2RU48 MTATP8P1-201ENST00000467115 207 ntBASIC-1.11□□□□□ -2.59
SMCO3A2RU48 RNU6-309P-201ENST00000364573 106 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 RNU6-639P-201ENST00000384074 107 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 RNU6-588P-201ENST00000410281 105 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 AC244090.1-201ENST00000441884 93 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.12□□□□□ -2.59
SMCO3A2RU48 MIR4280-201ENST00000582178 76 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 U4.1-201ENST00000620349 87 ntBASIC-1.12□□□□□ -2.59
SMCO3A2RU48 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.13□□□□□ -2.59
SMCO3A2RU48 RNU6-901P-201ENST00000384593 106 ntBASIC-1.13□□□□□ -2.59
SMCO3A2RU48 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.13□□□□□ -2.59
SMCO3A2RU48 MIR4636-201ENST00000582271 80 ntBASIC-1.13□□□□□ -2.59
SMCO3A2RU48 SNORD36A-201ENST00000362874 73 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 SNORD27-201ENST00000363981 72 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 MIR604-201ENST00000384880 94 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 MIR204-201ENST00000385200 110 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 RNU6-521P-201ENST00000516663 105 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 AL137067.1-201ENST00000615933 120 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 MIR6844-201ENST00000637122 62 ntBASIC-1.14□□□□□ -2.59
SMCO3A2RU48 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 SNORD38.2-201ENST00000384470 69 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 SNORA49-201ENST00000386157 136 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 RNU6-243P-201ENST00000391140 107 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 RNU6-735P-201ENST00000410612 107 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 RNU2-38P-201ENST00000410856 79 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 MTND2P23-201ENST00000422990 651 ntBASIC-1.15□□□□□ -2.59
SMCO3A2RU48 RNY1P11-201ENST00000363759 113 ntBASIC-1.16□□□□□ -2.6
SMCO3A2RU48 Y_RNA.552-201ENST00000384665 112 ntBASIC-1.16□□□□□ -2.6
SMCO3A2RU48 RNU7-6P-201ENST00000516845 62 ntBASIC-1.16□□□□□ -2.6
SMCO3A2RU48 AC108081.1-201ENST00000604358 221 ntBASIC-1.16□□□□□ -2.6
SMCO3A2RU48 AC145423.2-201ENST00000610631 239 ntBASIC-1.16□□□□□ -2.6
SMCO3A2RU48 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 SNORD18B-201ENST00000365659 72 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 MT-TQ-201ENST00000387372 72 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 snoU13.13-201ENST00000458842 104 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 AC107027.2-201ENST00000512197 115 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 SNORD38.3-201ENST00000516599 73 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 MTRNR2L2-201ENST00000604882 87 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 MIR7111-201ENST00000619751 72 ntBASIC-1.17□□□□□ -2.6
SMCO3A2RU48 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.18□□□□□ -2.6
SMCO3A2RU48 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.18□□□□□ -2.6
SMCO3A2RU48 MIR548H3-201ENST00000408771 118 ntBASIC-1.18□□□□□ -2.6
SMCO3A2RU48 RNU7-55P-201ENST00000459426 62 ntBASIC-1.18□□□□□ -2.6
SMCO3A2RU48 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.18□□□□□ -2.6
SMCO3A2RU48 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.18□□□□□ -2.6
SMCO3A2RU48 MIR6851-201ENST00000617060 67 ntBASIC-1.18□□□□□ -2.6
SMCO3A2RU48 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 SNORD115-19-201ENST00000363098 82 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 SNORD115-18-201ENST00000363293 82 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 RNU6-957P-201ENST00000363652 99 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 SNORD115-17-201ENST00000364612 82 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 MIR224-201ENST00000384889 81 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 MT-TI-201ENST00000387365 69 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 RNU6-918P-201ENST00000391219 106 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 MTCYBP6-201ENST00000441810 138 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 SNORD127-201ENST00000458892 86 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 RNU6-86P-201ENST00000606534 107 ntBASIC-1.19□□□□□ -2.6
SMCO3A2RU48 SNORD115-25-201ENST00000362619 82 ntBASIC-1.2□□□□□ -2.6
SMCO3A2RU48 MTATP6P23-201ENST00000440153 476 ntBASIC-1.2□□□□□ -2.6
SMCO3A2RU48 AC021146.6-201ENST00000514659 117 ntBASIC-1.2□□□□□ -2.6
SMCO3A2RU48 MIR3646-201ENST00000578301 84 ntBASIC-1.2□□□□□ -2.6
SMCO3A2RU48 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.22□□□□□ -2.6
SMCO3A2RU48 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.22□□□□□ -2.6
SMCO3A2RU48 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.22□□□□□ -2.6
SMCO3A2RU48 SNORD58.1-201ENST00000391313 66 ntBASIC-1.22□□□□□ -2.6
SMCO3A2RU48 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.22□□□□□ -2.6
SMCO3A2RU48 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.22□□□□□ -2.6
SMCO3A2RU48 MIR1255B1-201ENST00000636325 63 ntBASIC-1.22□□□□□ -2.6
SMCO3A2RU48 Y_RNA.251-201ENST00000364551 99 ntBASIC-1.23□□□□□ -2.61
SMCO3A2RU48 AC108676.2-201ENST00000605225 163 ntBASIC-1.23□□□□□ -2.61
SMCO3A2RU48 MIR548O2-201ENST00000616090 70 ntBASIC-1.23□□□□□ -2.61
SMCO3A2RU48 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.24□□□□□ -2.61
SMCO3A2RU48 SPINT5P-201ENST00000448174 155 ntBASIC-1.24□□□□□ -2.61
SMCO3A2RU48 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.24□□□□□ -2.61
SMCO3A2RU48 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 RNU6-312P-201ENST00000364629 107 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 Y_RNA.435-201ENST00000384095 112 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 MIR7-2-201ENST00000384970 110 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 MIR548F4-201ENST00000408515 105 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 RNU6-758P-201ENST00000516292 89 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 AC021753.1-201ENST00000635724 168 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 MIR3658-201ENST00000636291 56 ntBASIC-1.25□□□□□ -2.61
SMCO3A2RU48 SNORD101-201ENST00000384027 73 ntBASIC-1.26□□□□□ -2.61
SMCO3A2RU48 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 227.4 ms