Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 RNU6-243P-201ENST00000391140 107 ntBASIC1.8□□□□□ -2.12
FOXD3Q9UJU5 SNORD4B-201ENST00000459083 72 ntBASIC1.8□□□□□ -2.12
FOXD3Q9UJU5 SNORD79.1-201ENST00000516069 84 ntBASIC1.8□□□□□ -2.12
FOXD3Q9UJU5 MIR4771-2-201ENST00000577758 74 ntBASIC1.8□□□□□ -2.12
FOXD3Q9UJU5 MIR548H5-201ENST00000580314 60 ntBASIC1.8□□□□□ -2.12
FOXD3Q9UJU5 MIR4771-1-201ENST00000582617 74 ntBASIC1.8□□□□□ -2.12
FOXD3Q9UJU5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
FOXD3Q9UJU5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 SNORD36A-201ENST00000362874 73 ntBASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 RNA5SP160-201ENST00000364866 120 ntBASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 MIR519A1-201ENST00000385257 85 ntBASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 SNORD12-201ENST00000391002 90 ntBASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 SNORD100-201ENST00000408573 76 ntBASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 RPS26P5-201ENST00000418544 335 ntBASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 RNU6-638P-201ENST00000516582 104 ntBASIC1.79□□□□□ -2.12
FOXD3Q9UJU5 Y_RNA.13-201ENST00000362403 112 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 RNU6-228P-201ENST00000362700 106 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 Y_RNA.56-201ENST00000362798 112 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 SNORD115-37-201ENST00000363768 82 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 MIR635-201ENST00000384830 98 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 MIR516A2-201ENST00000384888 90 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 MIR516A1-201ENST00000385033 90 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXD3Q9UJU5 SNORD115-27-201ENST00000364430 82 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 MIR1236-201ENST00000408340 102 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 SNORD63B-201ENST00000411005 70 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 RNU1-40P-201ENST00000516816 164 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 RNU1-97P-201ENST00000516872 164 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 MIR5089-201ENST00000580047 84 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 AC013244.2-201ENST00000603396 103 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 Y_RNA.783-201ENST00000613546 102 ntBASIC1.77□□□□□ -2.13
FOXD3Q9UJU5 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.76□□□□□ -2.13
FOXD3Q9UJU5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
FOXD3Q9UJU5 Y_RNA.42-201ENST00000362660 108 ntBASIC1.76□□□□□ -2.13
FOXD3Q9UJU5 RNA5SP247-201ENST00000411181 105 ntBASIC1.76□□□□□ -2.13
FOXD3Q9UJU5 AC023827.1-201ENST00000569247 97 ntBASIC1.76□□□□□ -2.13
FOXD3Q9UJU5 Y_RNA.536-201ENST00000384621 113 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 RNU7-85P-201ENST00000458851 63 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 AC093729.1-201ENST00000513074 128 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 RNU7-40P-201ENST00000516397 64 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 SNORA70.22-201ENST00000517160 124 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 RNU7-156P-201ENST00000517214 74 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 MIR4676-201ENST00000583078 72 ntBASIC1.75□□□□□ -2.13
FOXD3Q9UJU5 RNU6-787P-201ENST00000384032 107 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 Y_RNA.437-201ENST00000384113 113 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 RNU6-466P-201ENST00000391224 103 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 RNU6-994P-201ENST00000410507 111 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 AC023790.1-201ENST00000482174 347 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 SNORD92-201ENST00000585078 85 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 MIR6845-201ENST00000613182 61 ntBASIC1.74□□□□□ -2.13
FOXD3Q9UJU5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
FOXD3Q9UJU5 MIR938-201ENST00000401216 83 ntBASIC1.73□□□□□ -2.13
FOXD3Q9UJU5 RNU7-106P-201ENST00000459514 67 ntBASIC1.73□□□□□ -2.13
FOXD3Q9UJU5 AC012493.3-201ENST00000604494 112 ntBASIC1.73□□□□□ -2.13
FOXD3Q9UJU5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
FOXD3Q9UJU5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 Y_RNA.283-201ENST00000364798 112 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 RNU6-524P-201ENST00000384270 107 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 RNU6-364P-201ENST00000384387 107 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 SUMO2P12-201ENST00000405924 140 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 MIR1255A-201ENST00000408338 113 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 TRAJ51-201ENST00000504127 63 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 RNU6-65P-201ENST00000516332 98 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 RNA5SP395-201ENST00000516567 118 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 Y_RNA.697-201ENST00000516776 113 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 MIR4536-1-201ENST00000583537 88 ntBASIC1.72□□□□□ -2.13
FOXD3Q9UJU5 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
FOXD3Q9UJU5 snoU13.11-201ENST00000459219 104 ntBASIC1.71□□□□□ -2.14
FOXD3Q9UJU5 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
FOXD3Q9UJU5 AC027335.2-201ENST00000624030 375 ntBASIC1.71□□□□□ -2.14
FOXD3Q9UJU5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 RNU4-32P-201ENST00000363404 141 ntBASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 RNU6-279P-201ENST00000391297 101 ntBASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 AC015818.7-201ENST00000428754 109 ntBASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 AC092628.1-201ENST00000436250 252 ntBASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 AC097635.1-201ENST00000450678 155 ntBASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
FOXD3Q9UJU5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 RNU6-1260P-201ENST00000362944 107 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 SNORA40.18-201ENST00000391200 128 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 AC067940.1-201ENST00000458411 300 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 Y_RNA.809-201ENST00000516058 95 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 AC140658.3-201ENST00000567603 271 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 AC138907.6-201ENST00000568401 126 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 AC138869.1-201ENST00000568623 124 ntBASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.69□□□□□ -2.14
FOXD3Q9UJU5 MIR1-1-201ENST00000362147 71 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 RNU6-369P-201ENST00000362515 102 ntBASIC1.68□□□□□ -2.14
FOXD3Q9UJU5 RNU6-811P-201ENST00000384069 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms