Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF216Q9NWF9 SNORA6-201ENST00000384033 151 ntBASIC3.73□□□□□ -1.81
RNF216Q9NWF9 snoU13.13-201ENST00000458842 104 ntBASIC3.73□□□□□ -1.81
RNF216Q9NWF9 RNU7-40P-201ENST00000516397 64 ntBASIC3.73□□□□□ -1.81
RNF216Q9NWF9 SNORA31.14-201ENST00000516728 116 ntBASIC3.73□□□□□ -1.81
RNF216Q9NWF9 MIR3124-201ENST00000582636 67 ntBASIC3.73□□□□□ -1.81
RNF216Q9NWF9 AC067863.3-201ENST00000624172 122 ntBASIC3.73□□□□□ -1.81
RNF216Q9NWF9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF216Q9NWF9 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
RNF216Q9NWF9 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF216Q9NWF9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF216Q9NWF9 SNORA31.25-201ENST00000517242 134 ntBASIC3.72□□□□□ -1.81
RNF216Q9NWF9 AC026333.2-201ENST00000542164 106 ntBASIC3.72□□□□□ -1.81
RNF216Q9NWF9 MIR5004-201ENST00000579078 107 ntBASIC3.72□□□□□ -1.81
RNF216Q9NWF9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RNF216Q9NWF9 Y_RNA.32-201ENST00000362589 110 ntBASIC3.71□□□□□ -1.82
RNF216Q9NWF9 SNORD116.2-201ENST00000391251 93 ntBASIC3.71□□□□□ -1.82
RNF216Q9NWF9 RNU7-74P-201ENST00000459104 62 ntBASIC3.71□□□□□ -1.82
RNF216Q9NWF9 MIR7112-201ENST00000616126 65 ntBASIC3.71□□□□□ -1.82
RNF216Q9NWF9 Y_RNA.174-201ENST00000363781 105 ntBASIC3.7□□□□□ -1.82
RNF216Q9NWF9 HMGN1P18-201ENST00000457642 277 ntBASIC3.7□□□□□ -1.82
RNF216Q9NWF9 AC245166.1-201ENST00000521012 253 ntBASIC3.7□□□□□ -1.82
RNF216Q9NWF9 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF216Q9NWF9 SNORD114-4-201ENST00000363962 75 ntBASIC3.69□□□□□ -1.82
RNF216Q9NWF9 MIR545-201ENST00000385085 106 ntBASIC3.69□□□□□ -1.82
RNF216Q9NWF9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF216Q9NWF9 SNORD111-201ENST00000408139 94 ntBASIC3.68□□□□□ -1.82
RNF216Q9NWF9 SNORA77B-201ENST00000578179 125 ntBASIC3.68□□□□□ -1.82
RNF216Q9NWF9 uc_338.16-201ENST00000621804 95 ntBASIC3.68□□□□□ -1.82
RNF216Q9NWF9 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RNF216Q9NWF9 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF216Q9NWF9 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
RNF216Q9NWF9 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RNF216Q9NWF9 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF216Q9NWF9 SNORA41B-201ENST00000384785 128 ntBASIC3.67□□□□□ -1.82
RNF216Q9NWF9 RNU1-119P-201ENST00000391122 165 ntBASIC3.67□□□□□ -1.82
RNF216Q9NWF9 RNU1-123P-201ENST00000458950 160 ntBASIC3.67□□□□□ -1.82
RNF216Q9NWF9 AC108210.2-201ENST00000503681 201 ntBASIC3.67□□□□□ -1.82
RNF216Q9NWF9 MIR8063-201ENST00000621930 81 ntBASIC3.67□□□□□ -1.82
RNF216Q9NWF9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RNF216Q9NWF9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF216Q9NWF9 COTL1P1-201ENST00000422309 375 ntBASIC3.66□□□□□ -1.82
RNF216Q9NWF9 S100A11P2-201ENST00000467589 312 ntBASIC3.66□□□□□ -1.82
RNF216Q9NWF9 MIR4460-201ENST00000577862 86 ntBASIC3.66□□□□□ -1.82
RNF216Q9NWF9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.66□□□□□ -1.82
RNF216Q9NWF9 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF216Q9NWF9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RNF216Q9NWF9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNF216Q9NWF9 SNORD56.3-201ENST00000363507 71 ntBASIC3.65□□□□□ -1.83
RNF216Q9NWF9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RNF216Q9NWF9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RNF216Q9NWF9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.65□□□□□ -1.83
RNF216Q9NWF9 SNORA64.4-201ENST00000516632 81 ntBASIC3.65□□□□□ -1.83
RNF216Q9NWF9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF216Q9NWF9 MT-TY-201ENST00000387409 66 ntBASIC3.64□□□□□ -1.83
RNF216Q9NWF9 SNORD67-201ENST00000390833 111 ntBASIC3.64□□□□□ -1.83
RNF216Q9NWF9 RNA5SP212-201ENST00000391223 107 ntBASIC3.64□□□□□ -1.83
RNF216Q9NWF9 AL157834.3-201ENST00000615543 103 ntBASIC3.64□□□□□ -1.83
RNF216Q9NWF9 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF216Q9NWF9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
RNF216Q9NWF9 RNU7-193P-201ENST00000516723 65 ntBASIC3.63□□□□□ -1.83
RNF216Q9NWF9 MIR548X-201ENST00000580069 75 ntBASIC3.63□□□□□ -1.83
RNF216Q9NWF9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
RNF216Q9NWF9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RNF216Q9NWF9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RNF216Q9NWF9 Y_RNA.246-201ENST00000364495 108 ntBASIC3.62□□□□□ -1.83
RNF216Q9NWF9 SUMO1P4-201ENST00000429430 302 ntBASIC3.62□□□□□ -1.83
RNF216Q9NWF9 MIR4804-201ENST00000581683 73 ntBASIC3.62□□□□□ -1.83
RNF216Q9NWF9 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
RNF216Q9NWF9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RNF216Q9NWF9 RNA5SP374-201ENST00000362939 125 ntBASIC3.61□□□□□ -1.83
RNF216Q9NWF9 SNORA15B-2-201ENST00000384058 135 ntBASIC3.61□□□□□ -1.83
RNF216Q9NWF9 SNORA15B-1-201ENST00000384334 135 ntBASIC3.61□□□□□ -1.83
RNF216Q9NWF9 AC023827.1-201ENST00000569247 97 ntBASIC3.61□□□□□ -1.83
RNF216Q9NWF9 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.61□□□□□ -1.83
RNF216Q9NWF9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RNF216Q9NWF9 RN7SL429P-201ENST00000479090 223 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 RN7SL489P-201ENST00000486185 223 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 RN7SL327P-201ENST00000488659 223 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 SCARNA20.6-201ENST00000517251 106 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 RN7SL853P-201ENST00000617250 223 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 AC006386.2-201ENST00000624491 75 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 AC012005.1-201ENST00000624575 75 ntBASIC3.6□□□□□ -1.83
RNF216Q9NWF9 RNA5SP276-201ENST00000362580 94 ntBASIC3.59□□□□□ -1.83
RNF216Q9NWF9 SNORA3A-201ENST00000364113 130 ntBASIC3.59□□□□□ -1.83
RNF216Q9NWF9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.59□□□□□ -1.83
RNF216Q9NWF9 RNU1-143P-201ENST00000516296 146 ntBASIC3.59□□□□□ -1.83
RNF216Q9NWF9 U1.23-201ENST00000610293 146 ntBASIC3.59□□□□□ -1.83
RNF216Q9NWF9 MIR8074-201ENST00000615081 81 ntBASIC3.59□□□□□ -1.83
RNF216Q9NWF9 RNU1-68P-201ENST00000615382 146 ntBASIC3.59□□□□□ -1.83
RNF216Q9NWF9 U1.39-201ENST00000621562 146 ntBASIC3.59□□□□□ -1.83
RNF216Q9NWF9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
RNF216Q9NWF9 MIR422A-201ENST00000362286 90 ntBASIC3.58□□□□□ -1.84
RNF216Q9NWF9 VTRNA1-1-201ENST00000363120 99 ntBASIC3.58□□□□□ -1.84
RNF216Q9NWF9 Y_RNA.125-201ENST00000363371 111 ntBASIC3.58□□□□□ -1.84
RNF216Q9NWF9 Y_RNA.325-201ENST00000365171 122 ntBASIC3.58□□□□□ -1.84
RNF216Q9NWF9 RNU7-56P-201ENST00000458744 62 ntBASIC3.58□□□□□ -1.84
RNF216Q9NWF9 SNORA40.16-201ENST00000517238 121 ntBASIC3.58□□□□□ -1.84
RNF216Q9NWF9 MIR6733-201ENST00000635723 61 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 925.8 ms