Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 MIR6718-201ENST00000616153 80 ntBASIC0.47□□□□□ -2.33
ZNF541Q9H0D2 U6.109-201ENST00000636749 87 ntBASIC0.47□□□□□ -2.33
ZNF541Q9H0D2 Y_RNA.32-201ENST00000362589 110 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 RNU6-291P-201ENST00000384720 107 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 RNU6-1321P-201ENST00000390905 107 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 RNU6-1307P-201ENST00000391012 103 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 MTND4LP9-201ENST00000427694 174 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 RNU6-1194P-201ENST00000516208 104 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 SNORA31.14-201ENST00000516728 116 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 MIR4636-201ENST00000582271 80 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 U7.2-201ENST00000607576 63 ntBASIC0.46□□□□□ -2.34
ZNF541Q9H0D2 MIR101-2-201ENST00000362195 79 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 RNY1P5-201ENST00000383890 115 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 RNU6-209P-201ENST00000384118 107 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.536-201ENST00000384621 113 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 RNU6-535P-201ENST00000384722 107 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.567-201ENST00000384736 106 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 MIR206-201ENST00000384872 86 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 AL158147.1-201ENST00000443970 75 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 RN7SKP12-201ENST00000516275 143 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 RNU6-781P-201ENST00000516377 101 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 RNA5SP94-201ENST00000516917 108 ntBASIC0.45□□□□□ -2.34
ZNF541Q9H0D2 RNU4-58P-201ENST00000363192 141 ntBASIC0.44□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
ZNF541Q9H0D2 RNU6-647P-201ENST00000364243 107 ntBASIC0.44□□□□□ -2.34
ZNF541Q9H0D2 RNU6-616P-201ENST00000384353 107 ntBASIC0.44□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.568-201ENST00000384742 113 ntBASIC0.44□□□□□ -2.34
ZNF541Q9H0D2 MIR1912-201ENST00000410389 80 ntBASIC0.44□□□□□ -2.34
ZNF541Q9H0D2 AC087741.2-201ENST00000619415 172 ntBASIC0.44□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.119-201ENST00000363301 96 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 RNA5SP245-201ENST00000364239 121 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 RNU6-1229P-201ENST00000364295 107 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 RNA5SP517-201ENST00000364724 117 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 SNORD77B-201ENST00000391112 67 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 MIR1263-201ENST00000408324 86 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 RNU6-257P-201ENST00000410238 98 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 RNU6-735P-201ENST00000410612 107 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.773-201ENST00000607168 90 ntBASIC0.43□□□□□ -2.34
ZNF541Q9H0D2 SNORA36.1-201ENST00000363424 132 ntBASIC0.42□□□□□ -2.34
ZNF541Q9H0D2 SNORD18A-201ENST00000363753 72 ntBASIC0.42□□□□□ -2.34
ZNF541Q9H0D2 RNY1P2-201ENST00000364820 117 ntBASIC0.42□□□□□ -2.34
ZNF541Q9H0D2 RNA5SP299-201ENST00000391203 116 ntBASIC0.42□□□□□ -2.34
ZNF541Q9H0D2 SNORA40.8-201ENST00000411034 126 ntBASIC0.42□□□□□ -2.34
ZNF541Q9H0D2 RNU7-6P-201ENST00000516845 62 ntBASIC0.42□□□□□ -2.34
ZNF541Q9H0D2 RNU6-235P-201ENST00000362644 107 ntBASIC0.41□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.448-201ENST00000384185 108 ntBASIC0.41□□□□□ -2.34
ZNF541Q9H0D2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.41□□□□□ -2.34
ZNF541Q9H0D2 RNU7-48P-201ENST00000458875 63 ntBASIC0.41□□□□□ -2.34
ZNF541Q9H0D2 SNORA68.3-201ENST00000515906 83 ntBASIC0.41□□□□□ -2.34
ZNF541Q9H0D2 RNU7-2P-201ENST00000516096 62 ntBASIC0.41□□□□□ -2.34
ZNF541Q9H0D2 SNORA63.5-201ENST00000363548 123 ntBASIC0.4□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.198-201ENST00000364013 98 ntBASIC0.4□□□□□ -2.34
ZNF541Q9H0D2 SNORD115-35-201ENST00000365122 82 ntBASIC0.4□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.343-201ENST00000365354 112 ntBASIC0.4□□□□□ -2.34
ZNF541Q9H0D2 MIRLET7F2-201ENST00000385277 83 ntBASIC0.4□□□□□ -2.34
ZNF541Q9H0D2 Y_RNA.528-201ENST00000384575 108 ntBASIC0.39□□□□□ -2.35
ZNF541Q9H0D2 SNORA40-201ENST00000388090 126 ntBASIC0.39□□□□□ -2.35
ZNF541Q9H0D2 MIR759-201ENST00000390224 91 ntBASIC0.39□□□□□ -2.35
ZNF541Q9H0D2 RNA5SP136-201ENST00000410906 107 ntBASIC0.39□□□□□ -2.35
ZNF541Q9H0D2 RNU6-1234P-201ENST00000516877 103 ntBASIC0.39□□□□□ -2.35
ZNF541Q9H0D2 SNORA25.18-201ENST00000607153 114 ntBASIC0.39□□□□□ -2.35
ZNF541Q9H0D2 TUG1_4.1-201ENST00000619464 181 ntBASIC0.39□□□□□ -2.35
ZNF541Q9H0D2 SNORD115-19-201ENST00000363098 82 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 SNORD115-18-201ENST00000363293 82 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 SNORD115-17-201ENST00000364612 82 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 SNORD58C-201ENST00000365223 64 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 SNORA8.2-201ENST00000384372 139 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 RNU6-429P-201ENST00000384582 108 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 MIR518A1-201ENST00000385068 85 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 RNU6-135P-201ENST00000516769 101 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 MIR5589-201ENST00000579442 60 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 MIR4500-201ENST00000579472 76 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 MIR3163-201ENST00000581592 73 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 MIR376B-201ENST00000614515 100 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.127-201ENST00000363386 109 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 SNORD118-201ENST00000363593 134 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.328-201ENST00000365208 113 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.630-201ENST00000411370 108 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 MIR1255B1-201ENST00000636325 63 ntBASIC0.38□□□□□ -2.35
ZNF541Q9H0D2 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.56-201ENST00000362798 112 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.98-201ENST00000363109 102 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 RNU6-774P-201ENST00000363238 107 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.213-201ENST00000364178 111 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.549-201ENST00000384657 102 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 SNORD28-201ENST00000384706 75 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.586-201ENST00000391146 98 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 RNU6-1211P-201ENST00000459179 105 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 RNA5SP47-201ENST00000517230 109 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 MIR3133-201ENST00000583157 78 ntBASIC0.37□□□□□ -2.35
ZNF541Q9H0D2 MIRLET7D-201ENST00000362263 87 ntBASIC0.36□□□□□ -2.35
ZNF541Q9H0D2 Y_RNA.525-201ENST00000384570 113 ntBASIC0.36□□□□□ -2.35
ZNF541Q9H0D2 MIR34C-201ENST00000384831 77 ntBASIC0.36□□□□□ -2.35
ZNF541Q9H0D2 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.36□□□□□ -2.35
ZNF541Q9H0D2 RNA5SP227-201ENST00000516184 113 ntBASIC0.36□□□□□ -2.35
ZNF541Q9H0D2 RNU6-1061P-201ENST00000516530 99 ntBASIC0.36□□□□□ -2.35
ZNF541Q9H0D2 RNU6-521P-201ENST00000516663 105 ntBASIC0.36□□□□□ -2.35
ZNF541Q9H0D2 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 217.9 ms