Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 MIR9-2-201ENST00000384838 87 ntBASIC-0.6□□□□□ -2.51
ZIC4Q8N9L1 MIR617-201ENST00000385030 97 ntBASIC-0.6□□□□□ -2.51
ZIC4Q8N9L1 RNU6-578P-201ENST00000390980 103 ntBASIC-0.6□□□□□ -2.51
ZIC4Q8N9L1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.6□□□□□ -2.51
ZIC4Q8N9L1 IGKV1-22-201ENST00000524313 326 ntBASIC-0.6□□□□□ -2.51
ZIC4Q8N9L1 AP001362.1-201ENST00000625165 124 ntBASIC-0.6□□□□□ -2.51
ZIC4Q8N9L1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.527-201ENST00000384573 102 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 RNU4-69P-201ENST00000410677 143 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 snoU13.11-201ENST00000459219 104 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 RNA5SP67-201ENST00000516422 131 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 MIR4643-201ENST00000577473 78 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 MTND4P29-201ENST00000503122 1372 ntBASIC-0.61□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 SNORD114-29-201ENST00000364819 70 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 RNU6-690P-201ENST00000365242 106 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 RNU6-643P-201ENST00000384018 107 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 RNU6-472P-201ENST00000384299 107 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 MIR196A1-201ENST00000388006 70 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 RNU7-123P-201ENST00000515911 60 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 RNU2-4P-201ENST00000606190 192 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 MIR376B-201ENST00000614515 100 ntBASIC-0.62□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 RNU6-571P-201ENST00000384128 107 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 RNU6-154P-201ENST00000384306 106 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 AC113618.1-201ENST00000416747 285 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 RNU7-2P-201ENST00000516096 62 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 RNU6-240P-201ENST00000516098 97 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 MIR4680-201ENST00000580906 66 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 AC011603.4-201ENST00000611325 277 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 U4.1-201ENST00000620349 87 ntBASIC-0.63□□□□□ -2.51
ZIC4Q8N9L1 MIR335-201ENST00000362173 94 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 SNORD115-44-201ENST00000365391 82 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 MT-TY-201ENST00000387409 66 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 MTATP6P23-201ENST00000440153 476 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 MIR2113-201ENST00000459007 91 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 SCARNA17-201ENST00000516183 144 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 RNU6-1137P-201ENST00000517073 99 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 AC009779.6-201ENST00000603972 165 ntBASIC-0.64□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 SNORA51.5-201ENST00000384126 131 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 SNORD56B-201ENST00000384713 71 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 MTND5P20-201ENST00000448677 143 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 RNY3P16-201ENST00000516338 101 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 RNU6-850P-201ENST00000516934 103 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 RNU6-988P-201ENST00000519081 107 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 MIR4460-201ENST00000577862 86 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 AC021443.1-201ENST00000604478 211 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 AC145423.2-201ENST00000610631 239 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 AC087741.2-201ENST00000619415 172 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 AC093726.3-201ENST00000637588 150 ntBASIC-0.65□□□□□ -2.51
ZIC4Q8N9L1 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 RNU6-47P-201ENST00000383866 107 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 MIR516A2-201ENST00000384888 90 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 MIR516A1-201ENST00000385033 90 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 SNORA49-201ENST00000386157 136 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 RNU7-164P-201ENST00000459221 62 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.702-201ENST00000516843 96 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 AC138907.4-201ENST00000570107 226 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 MIR4280-201ENST00000582178 76 ntBASIC-0.66□□□□□ -2.52
ZIC4Q8N9L1 RNU6-1082P-201ENST00000364574 107 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 SNORD115-35-201ENST00000365122 82 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 RNU6-616P-201ENST00000384353 107 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 RNU6-287P-201ENST00000516230 98 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 AC007012.1-201ENST00000567192 175 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 MIR548AX-201ENST00000580117 73 ntBASIC-0.67□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.68□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.68□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.68□□□□□ -2.52
ZIC4Q8N9L1 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.68□□□□□ -2.52
ZIC4Q8N9L1 RNU6-900P-201ENST00000384498 102 ntBASIC-0.68□□□□□ -2.52
ZIC4Q8N9L1 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 292.1 ms