Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 MIR4500-201ENST00000579472 76 ntBASIC0.52□□□□□ -2.33
USP41Q3LFD5 RNA5SP517-201ENST00000364724 117 ntBASIC0.51□□□□□ -2.33
USP41Q3LFD5 MIRLET7F2-201ENST00000385277 83 ntBASIC0.51□□□□□ -2.33
USP41Q3LFD5 RNU6-735P-201ENST00000410612 107 ntBASIC0.51□□□□□ -2.33
USP41Q3LFD5 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
USP41Q3LFD5 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
USP41Q3LFD5 AC025166.1-201ENST00000612411 163 ntBASIC0.51□□□□□ -2.33
USP41Q3LFD5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
USP41Q3LFD5 SNORA63.5-201ENST00000363548 123 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 SNORD115-35-201ENST00000365122 82 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 Y_RNA.328-201ENST00000365208 113 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 SNORD58C-201ENST00000365223 64 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 MIR539-201ENST00000365690 78 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 RNU6-1062P-201ENST00000383908 107 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 RNU6-429P-201ENST00000384582 108 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 Y_RNA.586-201ENST00000391146 98 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 Y_RNA.703-201ENST00000516846 111 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 RNU6-1234P-201ENST00000516877 103 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 RNU6-971P-201ENST00000516920 106 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 Y_RNA.773-201ENST00000607168 90 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 AC243829.6-201ENST00000612652 106 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 AP001362.1-201ENST00000625165 124 ntBASIC0.5□□□□□ -2.33
USP41Q3LFD5 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
USP41Q3LFD5 RNA5SP245-201ENST00000364239 121 ntBASIC0.49□□□□□ -2.33
USP41Q3LFD5 RNU6-1229P-201ENST00000364295 107 ntBASIC0.49□□□□□ -2.33
USP41Q3LFD5 MTND5P18-201ENST00000445624 1801 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 Y_RNA.56-201ENST00000362798 112 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 SNORD115-19-201ENST00000363098 82 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 SNORD115-18-201ENST00000363293 82 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 SNORD115-17-201ENST00000364612 82 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 SNORA40.8-201ENST00000411034 126 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 SNORD71-201ENST00000411292 86 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 RNU6-521P-201ENST00000516663 105 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 RNU6-135P-201ENST00000516769 101 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 SNORA25.18-201ENST00000607153 114 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 MIR1255B1-201ENST00000636325 63 ntBASIC0.48□□□□□ -2.33
USP41Q3LFD5 Y_RNA.127-201ENST00000363386 109 ntBASIC0.47□□□□□ -2.33
USP41Q3LFD5 SNORA36.1-201ENST00000363424 132 ntBASIC0.47□□□□□ -2.33
USP41Q3LFD5 Y_RNA.525-201ENST00000384570 113 ntBASIC0.47□□□□□ -2.33
USP41Q3LFD5 MIR548D2-201ENST00000384955 97 ntBASIC0.47□□□□□ -2.33
USP41Q3LFD5 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.47□□□□□ -2.33
USP41Q3LFD5 RNU6-772P-201ENST00000516042 105 ntBASIC0.47□□□□□ -2.33
USP41Q3LFD5 MIR376B-201ENST00000614515 100 ntBASIC0.47□□□□□ -2.33
USP41Q3LFD5 MIR924-201ENST00000638017 53 ntBASIC0.47□□□□□ -2.33
USP41Q3LFD5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
USP41Q3LFD5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.46□□□□□ -2.34
USP41Q3LFD5 RNU6-746P-201ENST00000384112 109 ntBASIC0.46□□□□□ -2.34
USP41Q3LFD5 SUMO1P3-201ENST00000439961 304 ntBASIC0.46□□□□□ -2.34
USP41Q3LFD5 RNU7-107P-201ENST00000459121 61 ntBASIC0.46□□□□□ -2.34
USP41Q3LFD5 MIR548H5-201ENST00000580314 60 ntBASIC0.46□□□□□ -2.34
USP41Q3LFD5 AL157777.2-201ENST00000258070 137 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 Y_RNA.346-201ENST00000365385 112 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 SNORA8.2-201ENST00000384372 139 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 MIR518A1-201ENST00000385068 85 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 SNORA7.5-201ENST00000410672 110 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 Y_RNA.630-201ENST00000411370 108 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 BX276092.1-201ENST00000427368 251 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 SNORA68.3-201ENST00000515906 83 ntBASIC0.45□□□□□ -2.34
USP41Q3LFD5 RNY4P6-201ENST00000363667 96 ntBASIC0.44□□□□□ -2.34
USP41Q3LFD5 RNU6-187P-201ENST00000384139 106 ntBASIC0.44□□□□□ -2.34
USP41Q3LFD5 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
USP41Q3LFD5 SNORD28-201ENST00000384706 75 ntBASIC0.44□□□□□ -2.34
USP41Q3LFD5 MIR34C-201ENST00000384831 77 ntBASIC0.44□□□□□ -2.34
USP41Q3LFD5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.44□□□□□ -2.34
USP41Q3LFD5 RNA5SP268-201ENST00000516828 124 ntBASIC0.44□□□□□ -2.34
USP41Q3LFD5 RNU7-10P-201ENST00000607194 63 ntBASIC0.44□□□□□ -2.34
USP41Q3LFD5 Y_RNA.49-201ENST00000362714 112 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 MIR635-201ENST00000384830 98 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 SCARNA16.5-201ENST00000517114 183 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 RNA5SP47-201ENST00000517230 109 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 AC138869.1-201ENST00000568623 124 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 AC244669.1-204ENST00000621564 178 ntBASIC0.43□□□□□ -2.34
USP41Q3LFD5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.43□□□□□ -2.34
USP41Q3LFD5 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.43□□□□□ -2.34
USP41Q3LFD5 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
USP41Q3LFD5 Y_RNA.344-201ENST00000365381 112 ntBASIC0.42□□□□□ -2.34
USP41Q3LFD5 SNORD50.2-201ENST00000365465 70 ntBASIC0.42□□□□□ -2.34
USP41Q3LFD5 Y_RNA.360-201ENST00000365512 102 ntBASIC0.42□□□□□ -2.34
USP41Q3LFD5 RNA5SP227-201ENST00000516184 113 ntBASIC0.42□□□□□ -2.34
USP41Q3LFD5 MIR330-201ENST00000362196 94 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 MIRLET7D-201ENST00000362263 87 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 SNORD118-201ENST00000363593 134 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 RNU6-704P-201ENST00000364162 103 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 Y_RNA.218-201ENST00000364218 104 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 RNU4-67P-201ENST00000364569 141 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 RNU6-80P-201ENST00000384195 107 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 AL353813.1-201ENST00000440700 253 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 TRAJ51-201ENST00000504127 63 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 AL512310.12-203ENST00000640543 90 ntBASIC0.41□□□□□ -2.34
USP41Q3LFD5 Y_RNA.155-201ENST00000363632 101 ntBASIC0.4□□□□□ -2.35
USP41Q3LFD5 SNORD38.2-201ENST00000384470 69 ntBASIC0.4□□□□□ -2.35
USP41Q3LFD5 MIR548M-201ENST00000408260 86 ntBASIC0.4□□□□□ -2.35
USP41Q3LFD5 MIR548I2-201ENST00000408348 149 ntBASIC0.4□□□□□ -2.35
USP41Q3LFD5 RNA5SP330-201ENST00000517096 96 ntBASIC0.4□□□□□ -2.35
USP41Q3LFD5 MIR8087-201ENST00000612745 78 ntBASIC0.4□□□□□ -2.35
USP41Q3LFD5 AC091304.10-201ENST00000641554 121 ntBASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 190.8 ms