Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.04□□□□□ -2.42
TNFRSF9Q07011 MIR548H5-201ENST00000580314 60 ntBASIC-0.04□□□□□ -2.42
TNFRSF9Q07011 AC141273.2-201ENST00000618989 130 ntBASIC-0.04□□□□□ -2.42
TNFRSF9Q07011 AL162376.1-201ENST00000624117 175 ntBASIC-0.04□□□□□ -2.42
TNFRSF9Q07011 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 RNU6-161P-201ENST00000363051 106 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 RNU4-84P-201ENST00000364200 139 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.299-201ENST00000364973 94 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 RNU6-929P-201ENST00000384429 107 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 MIR635-201ENST00000384830 98 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 MIR106A-201ENST00000384870 81 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 MIR610-201ENST00000385139 96 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 SNORD37.2-201ENST00000391075 66 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 BX276092.1-201ENST00000427368 251 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 RNU7-48P-201ENST00000458875 63 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.644-201ENST00000459006 113 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 MIR3925-201ENST00000584674 77 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 AC108081.1-201ENST00000604358 221 ntBASIC-0.05□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.98-201ENST00000363109 102 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 RNU6-449P-201ENST00000383914 107 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 RNU6-463P-201ENST00000384340 107 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 MIR599-201ENST00000385069 95 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 RNU6-269P-201ENST00000391077 97 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 AL603914.1-201ENST00000401964 204 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 RNU5E-3P-201ENST00000515913 68 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 RNU6-782P-201ENST00000516852 104 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 AL137067.1-201ENST00000615933 120 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 MIR6759-201ENST00000638110 65 ntBASIC-0.06□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 RNU6-616P-201ENST00000384353 107 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 SNORD41.1-201ENST00000391000 69 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 RNU7-2P-201ENST00000516096 62 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 RNY4P20-201ENST00000516678 93 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 MIR5706-201ENST00000579841 80 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 MIR4802-201ENST00000581881 80 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 AC072026.1-201ENST00000605023 201 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 RNU7-10P-201ENST00000607194 63 ntBASIC-0.07□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 RNU6-865P-201ENST00000364772 107 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 SNORD115-35-201ENST00000365122 82 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 SNORD77B-201ENST00000391112 67 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 HMGN2P22-201ENST00000427588 175 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 RNU6-861P-201ENST00000516745 106 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 AP002392.1-201ENST00000537692 208 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 uc_338.28-201ENST00000612082 187 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 AP001362.1-201ENST00000625165 124 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 AC099654.10-201ENST00000640395 161 ntBASIC-0.08□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 RNU6-652P-201ENST00000365488 107 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.489-201ENST00000384410 101 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 MT-TI-201ENST00000387365 69 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 MIR548I2-201ENST00000408348 149 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 RNU7-195P-201ENST00000458793 62 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 AC141557.1-201ENST00000540982 400 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 MIR4677-201ENST00000584153 80 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 MIR548AD-201ENST00000584780 82 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 AL670379.3-201ENST00000605040 251 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 MIR376B-201ENST00000614515 100 ntBASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.09□□□□□ -2.42
TNFRSF9Q07011 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNU6-379P-201ENST00000363813 104 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNU6-682P-201ENST00000363843 106 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNU4-11P-201ENST00000365287 132 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNU6V-201ENST00000384105 107 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNA5SP163-201ENST00000410304 99 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 SNORD63B-201ENST00000411005 70 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 AC097635.1-201ENST00000450678 155 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNA5SP484-201ENST00000458857 111 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNU7-106P-201ENST00000459514 67 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 RNU7-6P-201ENST00000516845 62 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 IGKV1-22-201ENST00000524313 326 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 NAMPTP3-201ENST00000569273 224 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 MIR3121-201ENST00000579680 77 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 MIR4743-201ENST00000584576 69 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 AC087741.2-201ENST00000619415 172 ntBASIC-0.1□□□□□ -2.43
TNFRSF9Q07011 MIR34C-201ENST00000384831 77 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 RNU6-460P-201ENST00000391158 108 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 MIR892B-201ENST00000401279 77 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 RNU7-197P-201ENST00000458836 62 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 RNU7-165P-201ENST00000458864 60 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 AC074198.2-201ENST00000508153 258 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.11□□□□□ -2.43
TNFRSF9Q07011 RNA5SP395-201ENST00000516567 118 ntBASIC-0.11□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 240.9 ms