Protein–RNA interactions for Protein: P17035

ZNF28, Zinc finger protein 28, humanhuman

Predictions only

Length 718 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF28P17035 SNORA72.6-201ENST00000384520 129 ntBASIC1.55□□□□□ -2.16
ZNF28P17035 MIR519C-201ENST00000385053 87 ntBASIC1.55□□□□□ -2.16
ZNF28P17035 Y_RNA.607-201ENST00000410597 98 ntBASIC1.55□□□□□ -2.16
ZNF28P17035 RNA5SP247-201ENST00000411181 105 ntBASIC1.55□□□□□ -2.16
ZNF28P17035 RNU6-531P-201ENST00000516694 104 ntBASIC1.55□□□□□ -2.16
ZNF28P17035 SNORA25.16-201ENST00000516741 121 ntBASIC1.55□□□□□ -2.16
ZNF28P17035 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.55□□□□□ -2.16
ZNF28P17035 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
ZNF28P17035 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ZNF28P17035 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
ZNF28P17035 RNU6-403P-201ENST00000363163 104 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 RNU4-58P-201ENST00000363192 141 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 SNORD48-201ENST00000364953 64 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 Y_RNA.313-201ENST00000365095 103 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 RNU1-36P-201ENST00000365130 165 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 Y_RNA.588-201ENST00000391254 102 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 RNU6-321P-201ENST00000410912 106 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 AC087499.7-201ENST00000441958 109 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 RNU7-95P-201ENST00000459222 64 ntBASIC1.54□□□□□ -2.16
ZNF28P17035 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 Y_RNA.330-201ENST00000365230 109 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 MIR1257-201ENST00000408490 117 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.53□□□□□ -2.16
ZNF28P17035 RPS27P16-201ENST00000425758 201 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 AC048334.1-201ENST00000477975 159 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 AC023790.1-201ENST00000482174 347 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 RN7SKP88-201ENST00000516847 250 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 AC023934.1-201ENST00000574529 2389 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 7SK.8-201ENST00000612110 250 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 7SK.11-201ENST00000615477 250 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 7SK.13-201ENST00000622040 250 ntBASIC1.53□□□□□ -2.16
ZNF28P17035 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
ZNF28P17035 RNU6-524P-201ENST00000384270 107 ntBASIC1.52□□□□□ -2.17
ZNF28P17035 snoU13.21-201ENST00000459368 105 ntBASIC1.52□□□□□ -2.17
ZNF28P17035 RNA5SP395-201ENST00000516567 118 ntBASIC1.52□□□□□ -2.17
ZNF28P17035 MIR4422-201ENST00000581938 83 ntBASIC1.52□□□□□ -2.17
ZNF28P17035 AL512598.1-201ENST00000610158 273 ntBASIC1.52□□□□□ -2.17
ZNF28P17035 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.52□□□□□ -2.17
ZNF28P17035 RNU4-32P-201ENST00000363404 141 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 SNORD115-37-201ENST00000363768 82 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 RNU6-279P-201ENST00000391297 101 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 MIR1323-201ENST00000408090 73 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 RNU6-1054P-201ENST00000411293 104 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 SNORD83.1-201ENST00000411362 77 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 SNORD4B-201ENST00000459083 72 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 RNU7-185P-201ENST00000459215 60 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 Y_RNA.648-201ENST00000459455 110 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 AL359821.1-201ENST00000605519 182 ntBASIC1.51□□□□□ -2.17
ZNF28P17035 SNORD113.3-201ENST00000364630 78 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 RNU6-652P-201ENST00000365488 107 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 MIR516A2-201ENST00000384888 90 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 MIR516A1-201ENST00000385033 90 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 SNORA75.2-201ENST00000391138 150 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 SNORA75.3-201ENST00000391231 150 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 RNU1-78P-201ENST00000391248 165 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 RNU6-1254P-201ENST00000391266 104 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 AC093729.1-201ENST00000513074 128 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.5□□□□□ -2.17
ZNF28P17035 SNORD53B-201ENST00000577887 78 ntBASIC1.5□□□□□ -2.17
ZNF28P17035 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.49□□□□□ -2.17
ZNF28P17035 RNU6-243P-201ENST00000391140 107 ntBASIC1.49□□□□□ -2.17
ZNF28P17035 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.49□□□□□ -2.17
ZNF28P17035 RNU7-85P-201ENST00000458851 63 ntBASIC1.49□□□□□ -2.17
ZNF28P17035 TRMT112P2-201ENST00000512910 132 ntBASIC1.49□□□□□ -2.17
ZNF28P17035 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.48□□□□□ -2.17
ZNF28P17035 MIR101-2-201ENST00000362195 79 ntBASIC1.48□□□□□ -2.17
ZNF28P17035 Y_RNA.316-201ENST00000365118 111 ntBASIC1.48□□□□□ -2.17
ZNF28P17035 RNU6-934P-201ENST00000365154 107 ntBASIC1.48□□□□□ -2.17
ZNF28P17035 MIR1236-201ENST00000408340 102 ntBASIC1.48□□□□□ -2.17
ZNF28P17035 RNU6-857P-201ENST00000515893 110 ntBASIC1.48□□□□□ -2.17
ZNF28P17035 AC036111.3-201ENST00000526389 112 ntBASIC1.48□□□□□ -2.17
ZNF28P17035 BX248123.2-201ENST00000606318 124 ntBASIC1.48□□□□□ -2.17
ZNF28P17035 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.48□□□□□ -2.17
ZNF28P17035 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
ZNF28P17035 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
ZNF28P17035 Y_RNA.13-201ENST00000362403 112 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 SNORD36A-201ENST00000362874 73 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 Y_RNA.226-201ENST00000364337 114 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 Y_RNA.244-201ENST00000364484 109 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
ZNF28P17035 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 SNORD100-201ENST00000408573 76 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 SNORD63B-201ENST00000411005 70 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 AC015818.7-201ENST00000428754 109 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 snoU13.11-201ENST00000459219 104 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 RNU6-1194P-201ENST00000516208 104 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 MIR4771-2-201ENST00000577758 74 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 MIR4771-1-201ENST00000582617 74 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 AC013244.2-201ENST00000603396 103 ntBASIC1.47□□□□□ -2.17
ZNF28P17035 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
ZNF28P17035 AC023827.1-201ENST00000569247 97 ntBASIC1.46□□□□□ -2.18
ZNF28P17035 MIR6082-201ENST00000613604 109 ntBASIC1.46□□□□□ -2.18
ZNF28P17035 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.46□□□□□ -2.18
ZNF28P17035 Y_RNA.363-201ENST00000365529 113 ntBASIC1.45□□□□□ -2.18
ZNF28P17035 RNU6-466P-201ENST00000391224 103 ntBASIC1.45□□□□□ -2.18
ZNF28P17035 AL591704.2-201ENST00000421658 181 ntBASIC1.45□□□□□ -2.18
ZNF28P17035 RNU7-106P-201ENST00000459514 67 ntBASIC1.45□□□□□ -2.18
ZNF28P17035 RNU6-65P-201ENST00000516332 98 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 185.2 ms