Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 TUG1_4.1-201ENST00000619464 181 ntBASIC0.27□□□□□ -2.37
UBL4AP11441 Y_RNA.127-201ENST00000363386 109 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 Y_RNA.180-201ENST00000363867 113 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 MIR1263-201ENST00000408324 86 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 MIR548I2-201ENST00000408348 149 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 AL158147.1-201ENST00000443970 75 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 RNA5SP436-201ENST00000516020 115 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 MIR3671-201ENST00000580455 88 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
UBL4AP11441 Y_RNA.294-201ENST00000364916 102 ntBASIC0.25□□□□□ -2.37
UBL4AP11441 RNU6-848P-201ENST00000515948 107 ntBASIC0.25□□□□□ -2.37
UBL4AP11441 RNU6-617P-201ENST00000516147 107 ntBASIC0.25□□□□□ -2.37
UBL4AP11441 RNU6-473P-201ENST00000516164 107 ntBASIC0.25□□□□□ -2.37
UBL4AP11441 RNU6-1049P-201ENST00000516414 107 ntBASIC0.25□□□□□ -2.37
UBL4AP11441 SNORD115-19-201ENST00000363098 82 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 SNORD115-18-201ENST00000363293 82 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 SNORD115-17-201ENST00000364612 82 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 Y_RNA.280-201ENST00000364765 112 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 MT-TI-201ENST00000387365 69 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 RNU6-1307P-201ENST00000391012 103 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 AC073261.1-201ENST00000429409 121 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 MIR376B-201ENST00000614515 100 ntBASIC0.24□□□□□ -2.37
UBL4AP11441 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
UBL4AP11441 MIR6515-201ENST00000619843 57 ntBASIC0.23□□□□□ -2.37
UBL4AP11441 MIR4315-1-201ENST00000636800 73 ntBASIC0.23□□□□□ -2.37
UBL4AP11441 MIR4315-2-201ENST00000640925 73 ntBASIC0.23□□□□□ -2.37
UBL4AP11441 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
UBL4AP11441 Y_RNA.170-201ENST00000363746 110 ntBASIC0.22□□□□□ -2.37
UBL4AP11441 RNU6-815P-201ENST00000384080 113 ntBASIC0.22□□□□□ -2.37
UBL4AP11441 BX276092.1-201ENST00000427368 251 ntBASIC0.22□□□□□ -2.37
UBL4AP11441 TRAJ51-201ENST00000504127 63 ntBASIC0.22□□□□□ -2.37
UBL4AP11441 RNU7-200P-201ENST00000516105 62 ntBASIC0.22□□□□□ -2.37
UBL4AP11441 RNU6-1212P-201ENST00000517023 104 ntBASIC0.22□□□□□ -2.37
UBL4AP11441 Y_RNA.343-201ENST00000365354 112 ntBASIC0.21□□□□□ -2.38
UBL4AP11441 Y_RNA.360-201ENST00000365512 102 ntBASIC0.21□□□□□ -2.38
UBL4AP11441 RNU6-716P-201ENST00000365621 103 ntBASIC0.21□□□□□ -2.38
UBL4AP11441 Y_RNA.528-201ENST00000384575 108 ntBASIC0.21□□□□□ -2.38
UBL4AP11441 MIR548L-201ENST00000408303 86 ntBASIC0.21□□□□□ -2.38
UBL4AP11441 RNU6-426P-201ENST00000516464 97 ntBASIC0.21□□□□□ -2.38
UBL4AP11441 RNU6-521P-201ENST00000516663 105 ntBASIC0.21□□□□□ -2.38
UBL4AP11441 RNU6-726P-201ENST00000364680 107 ntBASIC0.2□□□□□ -2.38
UBL4AP11441 Y_RNA.423-201ENST00000384057 113 ntBASIC0.2□□□□□ -2.38
UBL4AP11441 RNA5SP272-201ENST00000516095 111 ntBASIC0.2□□□□□ -2.38
UBL4AP11441 Y_RNA.773-201ENST00000607168 90 ntBASIC0.2□□□□□ -2.38
UBL4AP11441 SNORA9.1-201ENST00000362412 131 ntBASIC0.19□□□□□ -2.38
UBL4AP11441 SNORD38.2-201ENST00000384470 69 ntBASIC0.19□□□□□ -2.38
UBL4AP11441 RNU7-161P-201ENST00000517289 62 ntBASIC0.19□□□□□ -2.38
UBL4AP11441 MIR6755-201ENST00000619993 66 ntBASIC0.19□□□□□ -2.38
UBL4AP11441 AC067863.3-201ENST00000624172 122 ntBASIC0.19□□□□□ -2.38
UBL4AP11441 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.19□□□□□ -2.38
UBL4AP11441 RNA5SP403-201ENST00000363598 108 ntBASIC0.18□□□□□ -2.38
UBL4AP11441 RNU6-571P-201ENST00000384128 107 ntBASIC0.18□□□□□ -2.38
UBL4AP11441 MIR599-201ENST00000385069 95 ntBASIC0.18□□□□□ -2.38
UBL4AP11441 AC097635.1-201ENST00000450678 155 ntBASIC0.18□□□□□ -2.38
UBL4AP11441 snoU13.18-201ENST00000459483 104 ntBASIC0.18□□□□□ -2.38
UBL4AP11441 RNU6-187P-201ENST00000384139 106 ntBASIC0.17□□□□□ -2.38
UBL4AP11441 MIR34C-201ENST00000384831 77 ntBASIC0.17□□□□□ -2.38
UBL4AP11441 MIR598-201ENST00000384868 97 ntBASIC0.17□□□□□ -2.38
UBL4AP11441 MIR519A1-201ENST00000385257 85 ntBASIC0.17□□□□□ -2.38
UBL4AP11441 SNORA40-201ENST00000388090 126 ntBASIC0.17□□□□□ -2.38
UBL4AP11441 RNU6-781P-201ENST00000516377 101 ntBASIC0.17□□□□□ -2.38
UBL4AP11441 RNU6-170P-201ENST00000362832 104 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 SNORD114-23-201ENST00000363536 72 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 RNY4P6-201ENST00000363667 96 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 Y_RNA.221-201ENST00000364248 96 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 SNORA2A-201ENST00000383885 135 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 MIR548D2-201ENST00000384955 97 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 SNORD63B-201ENST00000411005 70 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 MTND4LP9-201ENST00000427694 174 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 RNU7-104P-201ENST00000459398 79 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
UBL4AP11441 RNU6-235P-201ENST00000362644 107 ntBASIC0.15□□□□□ -2.39
UBL4AP11441 RNU6-1234P-201ENST00000516877 103 ntBASIC0.15□□□□□ -2.39
UBL4AP11441 AC025166.1-201ENST00000612411 163 ntBASIC0.15□□□□□ -2.39
UBL4AP11441 MIR1255B1-201ENST00000636325 63 ntBASIC0.15□□□□□ -2.39
UBL4AP11441 Y_RNA.355-201ENST00000365462 98 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 RNY1P5-201ENST00000383890 115 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 Y_RNA.568-201ENST00000384742 113 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 RNU6-735P-201ENST00000410612 107 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 Y_RNA.809-201ENST00000516058 95 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 RNU6-1061P-201ENST00000516530 99 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 MTND5P40-201ENST00000559945 246 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 AL162376.1-201ENST00000624117 175 ntBASIC0.14□□□□□ -2.39
UBL4AP11441 RNU4-67P-201ENST00000364569 141 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 SNORD58C-201ENST00000365223 64 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 Y_RNA.342-201ENST00000365352 113 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 Y_RNA.508-201ENST00000384502 114 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 MIR760-201ENST00000390220 80 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 SNORD41.1-201ENST00000391000 69 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 SNORA7.5-201ENST00000410672 110 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 RNU7-195P-201ENST00000458793 62 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 RNU6-850P-201ENST00000516934 103 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 RNU6-255P-201ENST00000516957 105 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 MIR4752-201ENST00000579672 72 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 AL512310.12-203ENST00000640543 90 ntBASIC0.13□□□□□ -2.39
UBL4AP11441 RNU6-363P-201ENST00000362895 105 ntBASIC0.12□□□□□ -2.39
UBL4AP11441 MIR3668-201ENST00000582138 75 ntBASIC0.12□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 245.6 ms