Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 MIR4500-201ENST00000579472 76 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 MIR7107-201ENST00000611489 80 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 AC243829.6-201ENST00000612652 106 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 TUG1_4.1-201ENST00000619464 181 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 SNORA63.5-201ENST00000363548 123 ntBASIC0.27□□□□□ -2.37
SMIM18P0DKX4 RNY1P5-201ENST00000383890 115 ntBASIC0.27□□□□□ -2.37
SMIM18P0DKX4 SUMO1P3-201ENST00000439961 304 ntBASIC0.27□□□□□ -2.37
SMIM18P0DKX4 RNA5SP227-201ENST00000516184 113 ntBASIC0.27□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.213-201ENST00000364178 111 ntBASIC0.26□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.294-201ENST00000364916 102 ntBASIC0.26□□□□□ -2.37
SMIM18P0DKX4 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
SMIM18P0DKX4 MIR635-201ENST00000384830 98 ntBASIC0.26□□□□□ -2.37
SMIM18P0DKX4 RNU6-1307P-201ENST00000391012 103 ntBASIC0.26□□□□□ -2.37
SMIM18P0DKX4 RNU6-865P-201ENST00000364772 107 ntBASIC0.25□□□□□ -2.37
SMIM18P0DKX4 snoU13.18-201ENST00000459483 104 ntBASIC0.25□□□□□ -2.37
SMIM18P0DKX4 RNU6-426P-201ENST00000516464 97 ntBASIC0.25□□□□□ -2.37
SMIM18P0DKX4 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
SMIM18P0DKX4 SNORD115-24-201ENST00000363528 82 ntBASIC0.24□□□□□ -2.37
SMIM18P0DKX4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
SMIM18P0DKX4 MIR519A1-201ENST00000385257 85 ntBASIC0.24□□□□□ -2.37
SMIM18P0DKX4 MIR1263-201ENST00000408324 86 ntBASIC0.24□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.773-201ENST00000607168 90 ntBASIC0.24□□□□□ -2.37
SMIM18P0DKX4 MIR376B-201ENST00000614515 100 ntBASIC0.24□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.49-201ENST00000362714 112 ntBASIC0.23□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.343-201ENST00000365354 112 ntBASIC0.23□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.360-201ENST00000365512 102 ntBASIC0.23□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.528-201ENST00000384575 108 ntBASIC0.23□□□□□ -2.37
SMIM18P0DKX4 AC069271.1-201ENST00000445577 156 ntBASIC0.23□□□□□ -2.37
SMIM18P0DKX4 RNA5SP62-201ENST00000363457 110 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 RNA5SP403-201ENST00000363598 108 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 RNU6-726P-201ENST00000364680 107 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 Y_RNA.568-201ENST00000384742 113 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 MTND4LP9-201ENST00000427694 174 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 TRAJ51-201ENST00000504127 63 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 RNU6-521P-201ENST00000516663 105 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 RNU6-255P-201ENST00000516957 105 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 MIR4315-1-201ENST00000636800 73 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 MIR4315-2-201ENST00000640925 73 ntBASIC0.22□□□□□ -2.37
SMIM18P0DKX4 RNU6-571P-201ENST00000384128 107 ntBASIC0.21□□□□□ -2.38
SMIM18P0DKX4 Y_RNA.506-201ENST00000384494 102 ntBASIC0.21□□□□□ -2.38
SMIM18P0DKX4 SNORA40-201ENST00000388090 126 ntBASIC0.21□□□□□ -2.38
SMIM18P0DKX4 AC097635.1-201ENST00000450678 155 ntBASIC0.21□□□□□ -2.38
SMIM18P0DKX4 RNU6-781P-201ENST00000516377 101 ntBASIC0.21□□□□□ -2.38
SMIM18P0DKX4 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
SMIM18P0DKX4 MIR6515-201ENST00000619843 57 ntBASIC0.21□□□□□ -2.38
SMIM18P0DKX4 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.21□□□□□ -2.38
SMIM18P0DKX4 MIR548D2-201ENST00000384955 97 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 MIR936-201ENST00000401264 98 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 BX276092.1-201ENST00000427368 251 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 RNA5SP272-201ENST00000516095 111 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 RNU6-1234P-201ENST00000516877 103 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 RNU7-161P-201ENST00000517289 62 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 MIR4711-201ENST00000578274 70 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 MIR3668-201ENST00000582138 75 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 MIR6755-201ENST00000619993 66 ntBASIC0.2□□□□□ -2.38
SMIM18P0DKX4 SNORD114-23-201ENST00000363536 72 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 RNY4P6-201ENST00000363667 96 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 MIR34C-201ENST00000384831 77 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 MIR598-201ENST00000384868 97 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 MIR548I1-201ENST00000408810 149 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 AC025166.1-201ENST00000612411 163 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 AC022709.1-201ENST00000615967 87 ntBASIC0.19□□□□□ -2.38
SMIM18P0DKX4 RNU6-363P-201ENST00000362895 105 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 SNORD58C-201ENST00000365223 64 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 SNORD38.2-201ENST00000384470 69 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 MIR599-201ENST00000385069 95 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 SNORD41.1-201ENST00000391000 69 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 RNU6-257P-201ENST00000410238 98 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 RNU6-735P-201ENST00000410612 107 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 AC073261.1-201ENST00000429409 121 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 AL162376.1-201ENST00000624117 175 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 AC067863.3-201ENST00000624172 122 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 MIR1255B1-201ENST00000636325 63 ntBASIC0.18□□□□□ -2.38
SMIM18P0DKX4 RNU6-170P-201ENST00000362832 104 ntBASIC0.17□□□□□ -2.38
SMIM18P0DKX4 MIR539-201ENST00000365690 78 ntBASIC0.17□□□□□ -2.38
SMIM18P0DKX4 RNU6-907P-201ENST00000390924 102 ntBASIC0.17□□□□□ -2.38
SMIM18P0DKX4 SNORD63B-201ENST00000411005 70 ntBASIC0.17□□□□□ -2.38
SMIM18P0DKX4 RNU6-1018P-201ENST00000516577 106 ntBASIC0.17□□□□□ -2.38
SMIM18P0DKX4 SNORA9.1-201ENST00000362412 131 ntBASIC0.16□□□□□ -2.38
SMIM18P0DKX4 RNU6-235P-201ENST00000362644 107 ntBASIC0.16□□□□□ -2.38
SMIM18P0DKX4 RNU4-67P-201ENST00000364569 141 ntBASIC0.16□□□□□ -2.38
SMIM18P0DKX4 Y_RNA.346-201ENST00000365385 112 ntBASIC0.16□□□□□ -2.38
SMIM18P0DKX4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
SMIM18P0DKX4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.16□□□□□ -2.38
SMIM18P0DKX4 MTND5P18-201ENST00000445624 1801 ntBASIC0.15□□□□□ -2.38
SMIM18P0DKX4 Y_RNA.35-201ENST00000362601 101 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 RNU6-1260P-201ENST00000362944 107 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 Y_RNA.342-201ENST00000365352 113 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 RNU6-716P-201ENST00000365621 103 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 RNU6-187P-201ENST00000384139 106 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 RNU6-346P-201ENST00000516288 111 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 AC010487.4-201ENST00000637027 61 ntBASIC0.15□□□□□ -2.39
SMIM18P0DKX4 RNU6-1313P-201ENST00000362622 102 ntBASIC0.14□□□□□ -2.39
SMIM18P0DKX4 Y_RNA.221-201ENST00000364248 96 ntBASIC0.14□□□□□ -2.39
SMIM18P0DKX4 SNORA2A-201ENST00000383885 135 ntBASIC0.14□□□□□ -2.39
SMIM18P0DKX4 Y_RNA.809-201ENST00000516058 95 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 200.5 ms