Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNU7-200P-201ENST00000516105 62 ntBASIC0.27□□□□□ -2.37
RTCAO00442 AC021753.1-201ENST00000635724 168 ntBASIC0.27□□□□□ -2.37
RTCAO00442 Y_RNA.118-201ENST00000363300 101 ntBASIC0.26□□□□□ -2.37
RTCAO00442 Y_RNA.170-201ENST00000363746 110 ntBASIC0.26□□□□□ -2.37
RTCAO00442 RNA5SP245-201ENST00000364239 121 ntBASIC0.26□□□□□ -2.37
RTCAO00442 Y_RNA.328-201ENST00000365208 113 ntBASIC0.26□□□□□ -2.37
RTCAO00442 RNU6-1126P-201ENST00000384002 107 ntBASIC0.26□□□□□ -2.37
RTCAO00442 Y_RNA.448-201ENST00000384185 108 ntBASIC0.26□□□□□ -2.37
RTCAO00442 Y_RNA.488-201ENST00000384403 102 ntBASIC0.26□□□□□ -2.37
RTCAO00442 MIR613-201ENST00000385248 95 ntBASIC0.26□□□□□ -2.37
RTCAO00442 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
RTCAO00442 MIR7107-201ENST00000611489 80 ntBASIC0.26□□□□□ -2.37
RTCAO00442 AC244669.1-204ENST00000621564 178 ntBASIC0.26□□□□□ -2.37
RTCAO00442 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
RTCAO00442 Y_RNA.8-201ENST00000362353 102 ntBASIC0.25□□□□□ -2.37
RTCAO00442 Y_RNA.213-201ENST00000364178 111 ntBASIC0.25□□□□□ -2.37
RTCAO00442 RNU6-616P-201ENST00000384353 107 ntBASIC0.25□□□□□ -2.37
RTCAO00442 MT-TI-201ENST00000387365 69 ntBASIC0.25□□□□□ -2.37
RTCAO00442 RNU5E-3P-201ENST00000515913 68 ntBASIC0.25□□□□□ -2.37
RTCAO00442 TUG1_4.1-201ENST00000619464 181 ntBASIC0.25□□□□□ -2.37
RTCAO00442 SNORA63.5-201ENST00000363548 123 ntBASIC0.24□□□□□ -2.37
RTCAO00442 RNU6-1307P-201ENST00000391012 103 ntBASIC0.24□□□□□ -2.37
RTCAO00442 AC010487.4-201ENST00000637027 61 ntBASIC0.24□□□□□ -2.37
RTCAO00442 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.23□□□□□ -2.37
RTCAO00442 SUMO1P3-201ENST00000439961 304 ntBASIC0.23□□□□□ -2.37
RTCAO00442 RNA5SP227-201ENST00000516184 113 ntBASIC0.23□□□□□ -2.37
RTCAO00442 RNU7-6P-201ENST00000516845 62 ntBASIC0.23□□□□□ -2.37
RTCAO00442 RNA5SP403-201ENST00000363598 108 ntBASIC0.22□□□□□ -2.37
RTCAO00442 RNU6-865P-201ENST00000364772 107 ntBASIC0.22□□□□□ -2.37
RTCAO00442 RNU6-571P-201ENST00000384128 107 ntBASIC0.22□□□□□ -2.37
RTCAO00442 MIR759-201ENST00000390224 91 ntBASIC0.22□□□□□ -2.37
RTCAO00442 AC097635.1-201ENST00000450678 155 ntBASIC0.22□□□□□ -2.37
RTCAO00442 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
RTCAO00442 MIR376B-201ENST00000614515 100 ntBASIC0.22□□□□□ -2.37
RTCAO00442 Y_RNA.506-201ENST00000384494 102 ntBASIC0.21□□□□□ -2.38
RTCAO00442 Y_RNA.568-201ENST00000384742 113 ntBASIC0.21□□□□□ -2.38
RTCAO00442 MIR635-201ENST00000384830 98 ntBASIC0.21□□□□□ -2.38
RTCAO00442 MIR548I1-201ENST00000408810 149 ntBASIC0.21□□□□□ -2.38
RTCAO00442 RNU6-426P-201ENST00000516464 97 ntBASIC0.21□□□□□ -2.38
RTCAO00442 RNU6-255P-201ENST00000516957 105 ntBASIC0.21□□□□□ -2.38
RTCAO00442 AC069113.3-201ENST00000521019 150 ntBASIC0.21□□□□□ -2.38
RTCAO00442 MIR4315-1-201ENST00000636800 73 ntBASIC0.21□□□□□ -2.38
RTCAO00442 MIR4315-2-201ENST00000640925 73 ntBASIC0.21□□□□□ -2.38
RTCAO00442 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
RTCAO00442 SNORD115-24-201ENST00000363528 82 ntBASIC0.2□□□□□ -2.38
RTCAO00442 RNU6-726P-201ENST00000364680 107 ntBASIC0.2□□□□□ -2.38
RTCAO00442 Y_RNA.294-201ENST00000364916 102 ntBASIC0.2□□□□□ -2.38
RTCAO00442 Y_RNA.360-201ENST00000365512 102 ntBASIC0.2□□□□□ -2.38
RTCAO00442 MTND4LP9-201ENST00000427694 174 ntBASIC0.2□□□□□ -2.38
RTCAO00442 RNU7-161P-201ENST00000517289 62 ntBASIC0.2□□□□□ -2.38
RTCAO00442 MIR4500-201ENST00000579472 76 ntBASIC0.2□□□□□ -2.38
RTCAO00442 RN7SL793P-201ENST00000583259 296 ntBASIC0.2□□□□□ -2.38
RTCAO00442 MIR6755-201ENST00000619993 66 ntBASIC0.2□□□□□ -2.38
RTCAO00442 Y_RNA.343-201ENST00000365354 112 ntBASIC0.19□□□□□ -2.38
RTCAO00442 MIR548D2-201ENST00000384955 97 ntBASIC0.19□□□□□ -2.38
RTCAO00442 AC069271.1-201ENST00000445577 156 ntBASIC0.19□□□□□ -2.38
RTCAO00442 TRAJ51-201ENST00000504127 63 ntBASIC0.19□□□□□ -2.38
RTCAO00442 RNU6-1234P-201ENST00000516877 103 ntBASIC0.19□□□□□ -2.38
RTCAO00442 Y_RNA.773-201ENST00000607168 90 ntBASIC0.19□□□□□ -2.38
RTCAO00442 PVT1_3.1-201ENST00000620853 95 ntBASIC0.19□□□□□ -2.38
RTCAO00442 AL162376.1-201ENST00000624117 175 ntBASIC0.19□□□□□ -2.38
RTCAO00442 RNU6-170P-201ENST00000362832 104 ntBASIC0.18□□□□□ -2.38
RTCAO00442 SNORA42.1-201ENST00000363515 137 ntBASIC0.18□□□□□ -2.38
RTCAO00442 Y_RNA.528-201ENST00000384575 108 ntBASIC0.18□□□□□ -2.38
RTCAO00442 SNORA40-201ENST00000388090 126 ntBASIC0.18□□□□□ -2.38
RTCAO00442 SNORD41.1-201ENST00000391000 69 ntBASIC0.18□□□□□ -2.38
RTCAO00442 MIR1263-201ENST00000408324 86 ntBASIC0.18□□□□□ -2.38
RTCAO00442 RNU6-781P-201ENST00000516377 101 ntBASIC0.18□□□□□ -2.38
RTCAO00442 SNORA62.5-201ENST00000516634 120 ntBASIC0.18□□□□□ -2.38
RTCAO00442 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
RTCAO00442 Y_RNA.36-201ENST00000362602 112 ntBASIC0.17□□□□□ -2.38
RTCAO00442 SNORD58C-201ENST00000365223 64 ntBASIC0.17□□□□□ -2.38
RTCAO00442 SNORD38.2-201ENST00000384470 69 ntBASIC0.17□□□□□ -2.38
RTCAO00442 RNY1P4-201ENST00000384595 115 ntBASIC0.17□□□□□ -2.38
RTCAO00442 MIR34C-201ENST00000384831 77 ntBASIC0.17□□□□□ -2.38
RTCAO00442 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.17□□□□□ -2.38
RTCAO00442 RNU6-1018P-201ENST00000516577 106 ntBASIC0.17□□□□□ -2.38
RTCAO00442 RNU6-521P-201ENST00000516663 105 ntBASIC0.17□□□□□ -2.38
RTCAO00442 MIR3668-201ENST00000582138 75 ntBASIC0.17□□□□□ -2.38
RTCAO00442 Y_RNA.49-201ENST00000362714 112 ntBASIC0.16□□□□□ -2.38
RTCAO00442 RNU6-363P-201ENST00000362895 105 ntBASIC0.16□□□□□ -2.38
RTCAO00442 RNY4P6-201ENST00000363667 96 ntBASIC0.16□□□□□ -2.38
RTCAO00442 MIR539-201ENST00000365690 78 ntBASIC0.16□□□□□ -2.38
RTCAO00442 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
RTCAO00442 MIR193B-201ENST00000384907 83 ntBASIC0.16□□□□□ -2.38
RTCAO00442 RNU6-907P-201ENST00000390924 102 ntBASIC0.16□□□□□ -2.38
RTCAO00442 RNU6-257P-201ENST00000410238 98 ntBASIC0.16□□□□□ -2.38
RTCAO00442 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
RTCAO00442 MIR5706-201ENST00000579841 80 ntBASIC0.16□□□□□ -2.38
RTCAO00442 RNU1-29P-201ENST00000606574 126 ntBASIC0.16□□□□□ -2.38
RTCAO00442 RNU6-1313P-201ENST00000362622 102 ntBASIC0.15□□□□□ -2.39
RTCAO00442 RNU6-1260P-201ENST00000362944 107 ntBASIC0.15□□□□□ -2.39
RTCAO00442 Y_RNA.362-201ENST00000365518 110 ntBASIC0.15□□□□□ -2.39
RTCAO00442 MIR599-201ENST00000385069 95 ntBASIC0.15□□□□□ -2.39
RTCAO00442 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
RTCAO00442 RNU6-735P-201ENST00000410612 107 ntBASIC0.15□□□□□ -2.39
RTCAO00442 AC025166.1-201ENST00000612411 163 ntBASIC0.15□□□□□ -2.39
RTCAO00442 AC067863.3-201ENST00000624172 122 ntBASIC0.15□□□□□ -2.39
RTCAO00442 MIR1255B1-201ENST00000636325 63 ntBASIC0.15□□□□□ -2.39
RTCAO00442 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms