Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 Y_RNA.401-201ENST00000383965 117 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.477-201ENST00000384352 108 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.588-201ENST00000391254 102 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 SNORA40.8-201ENST00000411034 126 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MTATP6P21-201ENST00000440681 189 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MIR5190-201ENST00000581537 80 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU4-58P-201ENST00000363192 141 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-463P-201ENST00000384340 107 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MIR206-201ENST00000384872 86 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 snosnR66.1-201ENST00000391095 99 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 AL603914.1-201ENST00000401964 204 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 AF228730.3-201ENST00000436691 102 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 SNORD67.1-201ENST00000516618 108 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.697-201ENST00000516776 113 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 MIR6841-201ENST00000637129 72 ntBASIC0.21□□□□□ -2.38
SHANK1Q9Y566 RNU6-379P-201ENST00000363813 104 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.188-201ENST00000363952 111 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 RNU6-449P-201ENST00000383914 107 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 RPS29P8-201ENST00000445109 171 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 AC107027.2-201ENST00000512197 115 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR3121-201ENST00000579680 77 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 AC244669.1-204ENST00000621564 178 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR376A2-201ENST00000636782 80 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR4315-1-201ENST00000636800 73 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 MIR4315-2-201ENST00000640925 73 ntBASIC0.2□□□□□ -2.38
SHANK1Q9Y566 snoU2_19.4-201ENST00000364329 80 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNU6-47P-201ENST00000383866 107 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR1270-201ENST00000459320 83 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNA5SP33-201ENST00000516687 98 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNU6-861P-201ENST00000516745 106 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 SCARNA15-202ENST00000516881 127 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 AC138869.1-201ENST00000568623 124 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR548AX-201ENST00000580117 73 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 AC098479.1-201ENST00000609225 154 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR6082-201ENST00000613604 109 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR760-201ENST00000390220 80 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 SNORA75.5-201ENST00000391291 81 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 MIR3612-201ENST00000579753 87 ntBASIC0.19□□□□□ -2.38
SHANK1Q9Y566 RNU6-200P-201ENST00000364743 107 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-275P-201ENST00000364910 107 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-1327P-201ENST00000365302 105 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD28-201ENST00000384706 75 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 U8.15-201ENST00000390947 134 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-1086P-201ENST00000410930 100 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.18□□□□□ -2.38
SHANK1Q9Y566 AC141846.1-201ENST00000568348 142 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.144-201ENST00000363521 113 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNA5SP117-201ENST00000365294 118 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.366-201ENST00000365540 102 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.400-201ENST00000383963 111 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 RNU6-429P-201ENST00000384582 108 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD12C-201ENST00000386307 89 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 IGKV1-22-201ENST00000524313 326 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 MIR5706-201ENST00000579841 80 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 MIR548H5-201ENST00000580314 60 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 AL137067.1-201ENST00000615933 120 ntBASIC0.18□□□□□ -2.38
SHANK1Q9Y566 SNORD77B-201ENST00000391112 67 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 SNORA68.3-201ENST00000515906 83 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 RNU6-469P-201ENST00000516253 101 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 MIR4503-201ENST00000582187 83 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 RNU7-10P-201ENST00000607194 63 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 AC099654.10-201ENST00000640395 161 ntBASIC0.17□□□□□ -2.38
SHANK1Q9Y566 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.362-201ENST00000365518 110 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 MIR588-201ENST00000384900 83 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 MIR548I2-201ENST00000408348 149 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-848P-201ENST00000515948 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-617P-201ENST00000516147 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-473P-201ENST00000516164 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-1049P-201ENST00000516414 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 MIR4645-201ENST00000583158 77 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-509P-201ENST00000363519 107 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.171-201ENST00000363760 102 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 RNU6-682P-201ENST00000363843 106 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC138749.4-201ENST00000563970 127 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC105081.1-201ENST00000617727 106 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.778-201ENST00000620203 90 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 AC073869.9-201ENST00000641610 120 ntBASIC0.16□□□□□ -2.38
SHANK1Q9Y566 Y_RNA.13-201ENST00000362403 112 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 SNORA22.1-201ENST00000362701 134 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNA5SP133-201ENST00000363368 119 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.441-201ENST00000384123 112 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNU7-161P-201ENST00000517289 62 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 Y_RNA.29-201ENST00000362570 113 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 SNORA42.1-201ENST00000363515 137 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNU6-978P-201ENST00000364371 103 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNA5SP517-201ENST00000364724 117 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 SNORD38.2-201ENST00000384470 69 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 MIR617-201ENST00000385030 97 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 MIR1207-201ENST00000408249 87 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RNU6-588P-201ENST00000410281 105 ntBASIC0.15□□□□□ -2.39
SHANK1Q9Y566 RN7SKP19-201ENST00000516016 252 ntBASIC0.15□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms