Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 AC011195.1-201ENST00000578177 177 ntBASIC0.81□□□□□ -2.28
Q9N2J8 Y_RNA.773-201ENST00000607168 90 ntBASIC0.81□□□□□ -2.28
Q9N2J8 Y_RNA.4-201ENST00000362333 112 ntBASIC0.8□□□□□ -2.28
Q9N2J8 RNU6-865P-201ENST00000364772 107 ntBASIC0.8□□□□□ -2.28
Q9N2J8 SNORD113-1-201ENST00000365321 69 ntBASIC0.8□□□□□ -2.28
Q9N2J8 RNU6-22P-201ENST00000384355 107 ntBASIC0.8□□□□□ -2.28
Q9N2J8 Y_RNA.563-201ENST00000384707 108 ntBASIC0.8□□□□□ -2.28
Q9N2J8 MIR548A3-201ENST00000385297 97 ntBASIC0.8□□□□□ -2.28
Q9N2J8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.8□□□□□ -2.28
Q9N2J8 RNU6-1194P-201ENST00000516208 104 ntBASIC0.8□□□□□ -2.28
Q9N2J8 RNA5SP102-201ENST00000516865 106 ntBASIC0.8□□□□□ -2.28
Q9N2J8 RNU6-448P-201ENST00000517052 107 ntBASIC0.8□□□□□ -2.28
Q9N2J8 AL670379.3-201ENST00000605040 251 ntBASIC0.8□□□□□ -2.28
Q9N2J8 AC211469.2-201ENST00000605461 205 ntBASIC0.8□□□□□ -2.28
Q9N2J8 AL365222.1-201ENST00000614661 98 ntBASIC0.8□□□□□ -2.28
Q9N2J8 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
Q9N2J8 Y_RNA.261-201ENST00000364631 102 ntBASIC0.79□□□□□ -2.28
Q9N2J8 AC244098.3-201ENST00000424803 96 ntBASIC0.79□□□□□ -2.28
Q9N2J8 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
Q9N2J8 RNU6-406P-201ENST00000516470 107 ntBASIC0.79□□□□□ -2.28
Q9N2J8 AP001362.1-201ENST00000625165 124 ntBASIC0.79□□□□□ -2.28
Q9N2J8 Y_RNA.119-201ENST00000363301 96 ntBASIC0.78□□□□□ -2.28
Q9N2J8 Y_RNA.328-201ENST00000365208 113 ntBASIC0.78□□□□□ -2.28
Q9N2J8 Y_RNA.344-201ENST00000365381 112 ntBASIC0.78□□□□□ -2.28
Q9N2J8 Y_RNA.362-201ENST00000365518 110 ntBASIC0.78□□□□□ -2.28
Q9N2J8 Y_RNA.507-201ENST00000384500 99 ntBASIC0.78□□□□□ -2.28
Q9N2J8 RNU6-1168P-201ENST00000390831 104 ntBASIC0.78□□□□□ -2.28
Q9N2J8 RNU6-521P-201ENST00000516663 105 ntBASIC0.78□□□□□ -2.28
Q9N2J8 RNU6-531P-201ENST00000516694 104 ntBASIC0.78□□□□□ -2.28
Q9N2J8 AC007012.1-201ENST00000567192 175 ntBASIC0.78□□□□□ -2.28
Q9N2J8 MIR4679-2-201ENST00000578358 77 ntBASIC0.78□□□□□ -2.28
Q9N2J8 MIR1255B1-201ENST00000636325 63 ntBASIC0.78□□□□□ -2.28
Q9N2J8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Q9N2J8 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Q9N2J8 RNU4-67P-201ENST00000364569 141 ntBASIC0.77□□□□□ -2.29
Q9N2J8 Y_RNA.353-201ENST00000365440 108 ntBASIC0.77□□□□□ -2.29
Q9N2J8 MIR605-201ENST00000385078 83 ntBASIC0.77□□□□□ -2.29
Q9N2J8 SNORD100-201ENST00000408573 76 ntBASIC0.77□□□□□ -2.29
Q9N2J8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.77□□□□□ -2.29
Q9N2J8 RNU6-313P-201ENST00000516317 112 ntBASIC0.77□□□□□ -2.29
Q9N2J8 RNU6-479P-201ENST00000516348 105 ntBASIC0.77□□□□□ -2.29
Q9N2J8 Y_RNA.697-201ENST00000516776 113 ntBASIC0.77□□□□□ -2.29
Q9N2J8 MIR3612-201ENST00000579753 87 ntBASIC0.77□□□□□ -2.29
Q9N2J8 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
Q9N2J8 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
Q9N2J8 RNU6-363P-201ENST00000362895 105 ntBASIC0.76□□□□□ -2.29
Q9N2J8 Y_RNA.164-201ENST00000363709 102 ntBASIC0.76□□□□□ -2.29
Q9N2J8 RNA5SP117-201ENST00000365294 118 ntBASIC0.76□□□□□ -2.29
Q9N2J8 RNU4-45P-201ENST00000365469 141 ntBASIC0.76□□□□□ -2.29
Q9N2J8 RNU6-429P-201ENST00000384582 108 ntBASIC0.76□□□□□ -2.29
Q9N2J8 MIR548A1-201ENST00000385041 97 ntBASIC0.76□□□□□ -2.29
Q9N2J8 RNU6-1307P-201ENST00000391012 103 ntBASIC0.76□□□□□ -2.29
Q9N2J8 RPL39P34-201ENST00000477141 156 ntBASIC0.76□□□□□ -2.29
Q9N2J8 AC002350.1-201ENST00000490759 375 ntBASIC0.76□□□□□ -2.29
Q9N2J8 PSMC1P5-201ENST00000512850 177 ntBASIC0.76□□□□□ -2.29
Q9N2J8 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
Q9N2J8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.76□□□□□ -2.29
Q9N2J8 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
Q9N2J8 MIR101-2-201ENST00000362195 79 ntBASIC0.75□□□□□ -2.29
Q9N2J8 RNA5SP205-201ENST00000364653 136 ntBASIC0.75□□□□□ -2.29
Q9N2J8 RNU6-110P-201ENST00000384508 104 ntBASIC0.75□□□□□ -2.29
Q9N2J8 RNU6-1154P-201ENST00000391001 104 ntBASIC0.75□□□□□ -2.29
Q9N2J8 MIR1912-201ENST00000410389 80 ntBASIC0.75□□□□□ -2.29
Q9N2J8 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
Q9N2J8 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.75□□□□□ -2.29
Q9N2J8 MIR376B-201ENST00000614515 100 ntBASIC0.75□□□□□ -2.29
Q9N2J8 AL162726.3-218ENST00000636401 95 ntBASIC0.75□□□□□ -2.29
Q9N2J8 Y_RNA.85-201ENST00000363014 111 ntBASIC0.74□□□□□ -2.29
Q9N2J8 Y_RNA.155-201ENST00000363632 101 ntBASIC0.74□□□□□ -2.29
Q9N2J8 Y_RNA.309-201ENST00000365046 111 ntBASIC0.74□□□□□ -2.29
Q9N2J8 SNORA25.9-201ENST00000365087 128 ntBASIC0.74□□□□□ -2.29
Q9N2J8 RNU6-409P-201ENST00000384114 104 ntBASIC0.74□□□□□ -2.29
Q9N2J8 Y_RNA.536-201ENST00000384621 113 ntBASIC0.74□□□□□ -2.29
Q9N2J8 RNU6-816P-201ENST00000390914 107 ntBASIC0.74□□□□□ -2.29
Q9N2J8 RNU6-1268P-201ENST00000391214 107 ntBASIC0.74□□□□□ -2.29
Q9N2J8 RNU6-1239P-201ENST00000391310 107 ntBASIC0.74□□□□□ -2.29
Q9N2J8 SNORA7.5-201ENST00000410672 110 ntBASIC0.74□□□□□ -2.29
Q9N2J8 RNA5SP222-201ENST00000411039 105 ntBASIC0.74□□□□□ -2.29
Q9N2J8 AL606753.1-201ENST00000427435 87 ntBASIC0.74□□□□□ -2.29
Q9N2J8 MTND5P34-201ENST00000568888 325 ntBASIC0.74□□□□□ -2.29
Q9N2J8 MIR6767-201ENST00000637302 66 ntBASIC0.74□□□□□ -2.29
Q9N2J8 MIR6866-201ENST00000638146 69 ntBASIC0.74□□□□□ -2.29
Q9N2J8 MIR96-201ENST00000362288 78 ntBASIC0.73□□□□□ -2.29
Q9N2J8 Y_RNA.174-201ENST00000363781 105 ntBASIC0.73□□□□□ -2.29
Q9N2J8 SNORD38.2-201ENST00000384470 69 ntBASIC0.73□□□□□ -2.29
Q9N2J8 MIR499A-201ENST00000384903 122 ntBASIC0.73□□□□□ -2.29
Q9N2J8 RNU2-51P-201ENST00000410708 197 ntBASIC0.73□□□□□ -2.29
Q9N2J8 MIR4500-201ENST00000579472 76 ntBASIC0.73□□□□□ -2.29
Q9N2J8 MIR8070-201ENST00000616510 88 ntBASIC0.73□□□□□ -2.29
Q9N2J8 AL035470.1-201ENST00000622571 220 ntBASIC0.73□□□□□ -2.29
Q9N2J8 RNU1-93P-201ENST00000364704 169 ntBASIC0.72□□□□□ -2.29
Q9N2J8 Y_RNA.360-201ENST00000365512 102 ntBASIC0.72□□□□□ -2.29
Q9N2J8 RNU6-880P-201ENST00000384526 107 ntBASIC0.72□□□□□ -2.29
Q9N2J8 RNU6-291P-201ENST00000384720 107 ntBASIC0.72□□□□□ -2.29
Q9N2J8 RNU6-535P-201ENST00000384722 107 ntBASIC0.72□□□□□ -2.29
Q9N2J8 MIR34C-201ENST00000384831 77 ntBASIC0.72□□□□□ -2.29
Q9N2J8 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
Q9N2J8 RNU6-733P-201ENST00000410759 104 ntBASIC0.72□□□□□ -2.29
Q9N2J8 RNU6-1018P-201ENST00000516577 106 ntBASIC0.72□□□□□ -2.29
Q9N2J8 AL512310.12-203ENST00000640543 90 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 281.8 ms