Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 SNORD77B-201ENST00000391112 67 ntBASIC0.36□□□□□ -2.35
CHMP1AQ9HD42 AL603825.1-201ENST00000438481 80 ntBASIC0.36□□□□□ -2.35
CHMP1AQ9HD42 RNU6-135P-201ENST00000516769 101 ntBASIC0.36□□□□□ -2.35
CHMP1AQ9HD42 RNA5SP268-201ENST00000516828 124 ntBASIC0.36□□□□□ -2.35
CHMP1AQ9HD42 MIR6828-201ENST00000636181 60 ntBASIC0.36□□□□□ -2.35
CHMP1AQ9HD42 Y_RNA.448-201ENST00000384185 108 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 RNU6-616P-201ENST00000384353 107 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 MIR216A-201ENST00000385063 110 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 MIRLET7F2-201ENST00000385277 83 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 AC108059.2-201ENST00000434626 151 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 SUMO1P3-201ENST00000439961 304 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 SCARNA16.5-201ENST00000517114 183 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 MIR5087-201ENST00000635826 76 ntBASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.35□□□□□ -2.35
CHMP1AQ9HD42 MIR101-2-201ENST00000362195 79 ntBASIC0.34□□□□□ -2.36
CHMP1AQ9HD42 SNORD114-22-201ENST00000365423 72 ntBASIC0.34□□□□□ -2.36
CHMP1AQ9HD42 RNU6-429P-201ENST00000384582 108 ntBASIC0.34□□□□□ -2.36
CHMP1AQ9HD42 RNU7-48P-201ENST00000458875 63 ntBASIC0.34□□□□□ -2.36
CHMP1AQ9HD42 RN7SKP19-201ENST00000516016 252 ntBASIC0.34□□□□□ -2.36
CHMP1AQ9HD42 RNA5SP272-201ENST00000516095 111 ntBASIC0.34□□□□□ -2.36
CHMP1AQ9HD42 MIR4639-201ENST00000584938 69 ntBASIC0.34□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.56-201ENST00000362798 112 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.180-201ENST00000363867 113 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 RNA5SP499-201ENST00000363982 119 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 SNRPGP12-201ENST00000449481 213 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 RNU7-2P-201ENST00000516096 62 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 MIR7107-201ENST00000611489 80 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 AC087741.2-201ENST00000619415 172 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 AC244669.1-204ENST00000621564 178 ntBASIC0.33□□□□□ -2.36
CHMP1AQ9HD42 AC090625.1-201ENST00000357130 210 ntBASIC0.32□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.170-201ENST00000363746 110 ntBASIC0.32□□□□□ -2.36
CHMP1AQ9HD42 RNU6-647P-201ENST00000364243 107 ntBASIC0.32□□□□□ -2.36
CHMP1AQ9HD42 RNU6-1229P-201ENST00000364295 107 ntBASIC0.32□□□□□ -2.36
CHMP1AQ9HD42 MIR3671-201ENST00000580455 88 ntBASIC0.32□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.98-201ENST00000363109 102 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.191-201ENST00000363972 113 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.464-201ENST00000384282 110 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 AC092628.1-201ENST00000436250 252 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 AL158147.1-201ENST00000443970 75 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 AC108740.1-201ENST00000498629 225 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 RNU6-426P-201ENST00000516464 97 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 RNU7-6P-201ENST00000516845 62 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 MIR4500-201ENST00000579472 76 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 U7.2-201ENST00000607576 63 ntBASIC0.31□□□□□ -2.36
CHMP1AQ9HD42 SNORD115-35-201ENST00000365122 82 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.328-201ENST00000365208 113 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 SNORA50A-201ENST00000384225 134 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.488-201ENST00000384403 102 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 MIR1276-201ENST00000408707 83 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 AC069271.1-201ENST00000445577 156 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 AC244505.6-201ENST00000452829 130 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 RNU7-200P-201ENST00000516105 62 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 RNA5SP227-201ENST00000516184 113 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 RNU6-1212P-201ENST00000517023 104 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 TUG1_4.1-201ENST00000619464 181 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 AC091304.10-201ENST00000641554 121 ntBASIC0.3□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.127-201ENST00000363386 109 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 RNU6-1327P-201ENST00000365302 105 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 MIR1263-201ENST00000408324 86 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 MIR548J-201ENST00000408833 112 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.773-201ENST00000607168 90 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 MIR6504-201ENST00000613520 61 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 MIR376B-201ENST00000614515 100 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 MIR6788-201ENST00000618842 66 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 AP001362.1-201ENST00000625165 124 ntBASIC0.29□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.49-201ENST00000362714 112 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 SNORD115-19-201ENST00000363098 82 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 SNORD115-18-201ENST00000363293 82 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 Y_RNA.198-201ENST00000364013 98 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 SNORD115-17-201ENST00000364612 82 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 RNU6-781P-201ENST00000516377 101 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 RNU6-255P-201ENST00000516957 105 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 AC138869.1-201ENST00000568623 124 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 MIR548H5-201ENST00000580314 60 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 MIR3163-201ENST00000581592 73 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 MIR4452-201ENST00000583004 71 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 MIR151B-201ENST00000584249 96 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 AC243829.3-201ENST00000622177 108 ntBASIC0.28□□□□□ -2.36
CHMP1AQ9HD42 RNA5SP62-201ENST00000363457 110 ntBASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 SNORD115-24-201ENST00000363528 82 ntBASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 RNU6-865P-201ENST00000364772 107 ntBASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 RNU6-735P-201ENST00000410612 107 ntBASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 RNA5SP136-201ENST00000410906 107 ntBASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 RNU6-863P-201ENST00000515989 104 ntBASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 MIR5000-201ENST00000577717 103 ntBASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.27□□□□□ -2.37
CHMP1AQ9HD42 BX276092.1-201ENST00000427368 251 ntBASIC0.26□□□□□ -2.37
CHMP1AQ9HD42 TRAJ51-201ENST00000504127 63 ntBASIC0.26□□□□□ -2.37
CHMP1AQ9HD42 AC243829.6-201ENST00000612652 106 ntBASIC0.26□□□□□ -2.37
CHMP1AQ9HD42 MIR6755-201ENST00000619993 66 ntBASIC0.26□□□□□ -2.37
CHMP1AQ9HD42 Y_RNA.213-201ENST00000364178 111 ntBASIC0.25□□□□□ -2.37
CHMP1AQ9HD42 RNU6-815P-201ENST00000384080 113 ntBASIC0.25□□□□□ -2.37
CHMP1AQ9HD42 RNU6-187P-201ENST00000384139 106 ntBASIC0.25□□□□□ -2.37
CHMP1AQ9HD42 MIR34C-201ENST00000384831 77 ntBASIC0.25□□□□□ -2.37
CHMP1AQ9HD42 MTND4LP9-201ENST00000427694 174 ntBASIC0.25□□□□□ -2.37
CHMP1AQ9HD42 RNU6-1234P-201ENST00000516877 103 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms