Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 CPD-202ENST00000543464 4007 ntTSL 2 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP4-4Q9BYR3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR20A-201ENST00000362279 71 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU1-23P-201ENST00000363361 144 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP493-201ENST00000364115 91 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP283-201ENST00000365604 119 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-1324P-201ENST00000384222 107 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA5.1-201ENST00000384275 131 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR23B-201ENST00000384832 97 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR153-1-201ENST00000384914 90 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR489-201ENST00000384923 84 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR592-201ENST00000384959 97 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR134-201ENST00000385258 73 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR653-201ENST00000385279 96 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA49-201ENST00000386157 136 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 AC006210.1-201ENST00000424882 111 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 HMGN2P23-201ENST00000456759 269 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA84-201ENST00000459229 133 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 snoU13.10-201ENST00000459301 103 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 AC099513.1-201ENST00000490423 301 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 SCARNA22-201ENST00000503991 125 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 AC015795.1-201ENST00000513669 327 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP249-201ENST00000516127 99 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP464-201ENST00000516251 108 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA48.11-201ENST00000517015 89 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR3169-201ENST00000578032 83 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4660-201ENST00000583549 74 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 SOX2OT_exon4.1-201ENST00000610449 109 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 AC116447.1-201ENST00000613153 453 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 AC022513.1-201ENST00000624512 117 ntBASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP4-4Q9BYR3 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-230P-201ENST00000362457 104 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.164-201ENST00000363709 102 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU1-132P-201ENST00000364300 164 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 RNA5SP509-201ENST00000364577 119 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-726P-201ENST00000364680 107 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 Y_RNA.355-201ENST00000365462 98 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA70F-201ENST00000384142 135 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR509-1-201ENST00000385265 94 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORD96B-201ENST00000386148 79 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR670-201ENST00000390142 98 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR509-2-201ENST00000390724 91 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA48.7-201ENST00000391302 135 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR548L-201ENST00000408303 86 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 SNORA57.3-201ENST00000411095 141 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 RPS29P17-201ENST00000430795 166 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MRPS21P3-201ENST00000436696 262 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-983P-201ENST00000516004 103 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 RNU6-135P-201ENST00000516769 101 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 snoU109.6-201ENST00000516831 118 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 AC007224.1-201ENST00000564410 144 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4709-201ENST00000577272 72 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4284-201ENST00000578924 81 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR23C-201ENST00000579846 100 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4512-201ENST00000583257 77 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR4473-201ENST00000583731 91 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR7853-201ENST00000584820 132 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR92B-201ENST00000607575 96 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR6779-201ENST00000617283 64 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MIR6875-201ENST00000617506 72 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 ZYXP1-201ENST00000617638 118 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MAPK10-286ENST00000641208 8747 ntBASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
KRTAP4-4Q9BYR3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
KRTAP4-4Q9BYR3 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 1035 ms