Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 RNU6-30P-201ENST00000384561 107 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 MIR1263-201ENST00000408324 86 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 RNU6-1165P-201ENST00000410119 107 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 Y_RNA.617-201ENST00000410920 90 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 AL157398.1-201ENST00000452981 186 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 RNU7-62P-201ENST00000458856 62 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 RNU7-80P-201ENST00000459562 61 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 RN7SKP19-201ENST00000516016 252 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 RNU4-54P-201ENST00000516428 129 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 RNU7-53P-201ENST00000516705 60 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 AC133485.4-201ENST00000561835 220 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 AC138907.4-201ENST00000570107 226 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.43□□□□□ -2.34
CDX2Q99626 AC011603.4-201ENST00000611325 277 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 MIR1255B1-201ENST00000636325 63 ntBASIC0.43□□□□□ -2.34
CDX2Q99626 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.42□□□□□ -2.34
CDX2Q99626 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.42□□□□□ -2.34
CDX2Q99626 AL157777.2-201ENST00000258070 137 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 Y_RNA.168-201ENST00000363740 102 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 SNORD113.3-201ENST00000364630 78 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 Y_RNA.430-201ENST00000384081 110 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 Y_RNA.531-201ENST00000384589 121 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 SNORD38B-201ENST00000384690 67 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 AL353813.1-201ENST00000440700 253 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 MIR2115-201ENST00000516657 100 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 AC141846.1-201ENST00000568348 142 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 MIR4771-2-201ENST00000577758 74 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 MIR3910-1-201ENST00000580936 111 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 MIR4771-1-201ENST00000582617 74 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.42□□□□□ -2.34
CDX2Q99626 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 AL137067.1-201ENST00000615933 120 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 AC087741.2-201ENST00000619415 172 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 SNORD38B-202ENST00000625943 69 ntBASIC0.42□□□□□ -2.34
CDX2Q99626 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.41□□□□□ -2.34
CDX2Q99626 Y_RNA.242-201ENST00000364473 110 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNU6-934P-201ENST00000365154 107 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNU6-616P-201ENST00000384353 107 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 MIRLET7F2-201ENST00000385277 83 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 SNORA40-201ENST00000388090 126 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 Y_RNA.588-201ENST00000391254 102 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 MIR548M-201ENST00000408260 86 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 AL022718.1-201ENST00000412004 84 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNU7-113P-201ENST00000459273 62 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNU6-772P-201ENST00000516042 105 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNU7-79P-201ENST00000516082 62 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNU6-1061P-201ENST00000516530 99 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 SNORD67.1-201ENST00000516618 108 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNA5SP33-201ENST00000516687 98 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 SNORA25.16-201ENST00000516741 121 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 RNU7-70P-201ENST00000516941 66 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 AL662814.1-201ENST00000617364 121 ntBASIC0.41□□□□□ -2.34
CDX2Q99626 SNORD58C-201ENST00000365223 64 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 Y_RNA.344-201ENST00000365381 112 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 Y_RNA.454-201ENST00000384224 113 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 RNU6-1067P-201ENST00000384752 107 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CDX2Q99626 RNU1-119P-201ENST00000391122 165 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 RNU6-1086P-201ENST00000410930 100 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 Z95118.1-201ENST00000421372 247 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 RNU7-56P-201ENST00000458744 62 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 RNU7-185P-201ENST00000459215 60 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 SNORD33.1-201ENST00000516213 88 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 RNU6-659P-201ENST00000516454 104 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 Y_RNA.692-201ENST00000516627 105 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 RNU7-35P-201ENST00000517174 62 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 MIR4491-201ENST00000581087 68 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 MIR4676-201ENST00000583078 72 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 MIR4264-201ENST00000583520 66 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 AP000753.3-201ENST00000604083 169 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 U7.2-201ENST00000607576 63 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 MIR8066-201ENST00000617280 78 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 AL035470.1-201ENST00000622571 220 ntBASIC0.4□□□□□ -2.35
CDX2Q99626 MTND5P18-201ENST00000445624 1801 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 MIR377-201ENST00000362145 69 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 Y_RNA.13-201ENST00000362403 112 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 SNORD115-2-201ENST00000362842 82 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 RNA5SP245-201ENST00000364239 121 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 Y_RNA.247-201ENST00000364500 92 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 SNORD115-20-201ENST00000365099 82 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 Y_RNA.343-201ENST00000365354 112 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 SNORD18B-201ENST00000365659 72 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 RNU6-945P-201ENST00000383947 107 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 Y_RNA.528-201ENST00000384575 108 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 RNU6-959P-201ENST00000384671 107 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 MT-TN-201ENST00000387400 73 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 RNU6-1321P-201ENST00000390905 107 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 RNU7-137P-201ENST00000516788 62 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 RNU7-6P-201ENST00000516845 62 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 AC018659.1-201ENST00000551083 169 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 MTND5P34-201ENST00000568888 325 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 MIR5190-201ENST00000581537 80 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 MIR4804-201ENST00000581683 73 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 U2.22-201ENST00000636441 106 ntBASIC0.39□□□□□ -2.35
CDX2Q99626 RNU6-81P-201ENST00000365608 104 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms