Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 RNU7-164P-201ENST00000459221 62 ntBASIC0.36□□□□□ -2.35
TM4SF1P30408 RNU7-120P-201ENST00000459334 63 ntBASIC0.36□□□□□ -2.35
TM4SF1P30408 RNU6-388P-201ENST00000517012 105 ntBASIC0.36□□□□□ -2.35
TM4SF1P30408 RNU6-389P-201ENST00000517048 105 ntBASIC0.36□□□□□ -2.35
TM4SF1P30408 MIRLET7F2-201ENST00000385277 83 ntBASIC0.35□□□□□ -2.35
TM4SF1P30408 SNORD77B-201ENST00000391112 67 ntBASIC0.35□□□□□ -2.35
TM4SF1P30408 RNU6-1135P-201ENST00000411083 103 ntBASIC0.35□□□□□ -2.35
TM4SF1P30408 RNA5SP285-201ENST00000516619 119 ntBASIC0.35□□□□□ -2.35
TM4SF1P30408 SNORA25.16-201ENST00000516741 121 ntBASIC0.35□□□□□ -2.35
TM4SF1P30408 SNORA25.18-201ENST00000607153 114 ntBASIC0.35□□□□□ -2.35
TM4SF1P30408 Y_RNA.32-201ENST00000362589 110 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 RNA5SP133-201ENST00000363368 119 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 RNU6-35P-201ENST00000384530 107 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 MIR644A-201ENST00000385262 94 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 RNU6-138P-201ENST00000515952 107 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 RNA5SP134-201ENST00000516492 96 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 RNU7-121P-201ENST00000516604 62 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 MIR548AE2-201ENST00000583456 67 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 U6.109-201ENST00000636749 87 ntBASIC0.34□□□□□ -2.36
TM4SF1P30408 SNORD114-10-201ENST00000363409 72 ntBASIC0.33□□□□□ -2.36
TM4SF1P30408 SNORD118-201ENST00000363593 134 ntBASIC0.33□□□□□ -2.36
TM4SF1P30408 RNU6-291P-201ENST00000384720 107 ntBASIC0.33□□□□□ -2.36
TM4SF1P30408 Y_RNA.690-201ENST00000516603 95 ntBASIC0.33□□□□□ -2.36
TM4SF1P30408 SNORA31.14-201ENST00000516728 116 ntBASIC0.33□□□□□ -2.36
TM4SF1P30408 AC096949.1-201ENST00000412047 152 ntBASIC0.32□□□□□ -2.36
TM4SF1P30408 RNU6-861P-201ENST00000516745 106 ntBASIC0.32□□□□□ -2.36
TM4SF1P30408 RNA5SP268-201ENST00000516828 124 ntBASIC0.32□□□□□ -2.36
TM4SF1P30408 AC112693.2-201ENST00000556538 232 ntBASIC0.32□□□□□ -2.36
TM4SF1P30408 snosnR66.1-201ENST00000391095 99 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 AL603914.1-201ENST00000401964 204 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 RNU4-69P-201ENST00000410677 143 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 RNA5SP227-201ENST00000516184 113 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 RNU2-35P-201ENST00000516446 142 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 SNORD67.1-201ENST00000516618 108 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 RNU6-531P-201ENST00000516694 104 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 RNU7-137P-201ENST00000516788 62 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 SNORA81.3-201ENST00000517283 198 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.31□□□□□ -2.36
TM4SF1P30408 MTND5P34-201ENST00000568888 325 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 MIR4639-201ENST00000584938 69 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 MIR3658-201ENST00000636291 56 ntBASIC0.31□□□□□ -2.36
TM4SF1P30408 SNRPGP12-201ENST00000449481 213 ntBASIC0.3□□□□□ -2.36
TM4SF1P30408 RNU5E-3P-201ENST00000515913 68 ntBASIC0.3□□□□□ -2.36
TM4SF1P30408 SCARNA16.5-201ENST00000517114 183 ntBASIC0.3□□□□□ -2.36
TM4SF1P30408 RNU7-10P-201ENST00000607194 63 ntBASIC0.3□□□□□ -2.36
TM4SF1P30408 AC091304.10-201ENST00000641554 121 ntBASIC0.3□□□□□ -2.36
TM4SF1P30408 Y_RNA.257-201ENST00000364596 102 ntBASIC0.29□□□□□ -2.36
TM4SF1P30408 Y_RNA.272-201ENST00000364696 102 ntBASIC0.29□□□□□ -2.36
TM4SF1P30408 Y_RNA.441-201ENST00000384123 112 ntBASIC0.29□□□□□ -2.36
TM4SF1P30408 RNU2-59P-201ENST00000410482 191 ntBASIC0.29□□□□□ -2.36
TM4SF1P30408 RNU7-123P-201ENST00000515911 60 ntBASIC0.29□□□□□ -2.36
TM4SF1P30408 SNORD44.1-201ENST00000363202 61 ntBASIC0.28□□□□□ -2.36
TM4SF1P30408 Y_RNA.785-201ENST00000384290 109 ntBASIC0.28□□□□□ -2.36
TM4SF1P30408 RNA5SP299-201ENST00000391203 116 ntBASIC0.28□□□□□ -2.36
TM4SF1P30408 HAR1A.1-201ENST00000459583 118 ntBASIC0.28□□□□□ -2.36
TM4SF1P30408 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.28□□□□□ -2.36
TM4SF1P30408 MIR6759-201ENST00000638110 65 ntBASIC0.28□□□□□ -2.36
TM4SF1P30408 Y_RNA.298-201ENST00000364960 107 ntBASIC0.27□□□□□ -2.37
TM4SF1P30408 RNU4-11P-201ENST00000365287 132 ntBASIC0.27□□□□□ -2.37
TM4SF1P30408 MIR513C-201ENST00000401352 84 ntBASIC0.27□□□□□ -2.37
TM4SF1P30408 AC073261.1-201ENST00000429409 121 ntBASIC0.27□□□□□ -2.37
TM4SF1P30408 RNU2-60P-201ENST00000517290 128 ntBASIC0.27□□□□□ -2.37
TM4SF1P30408 MIR548H5-201ENST00000580314 60 ntBASIC0.27□□□□□ -2.37
TM4SF1P30408 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
TM4SF1P30408 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 Y_RNA.119-201ENST00000363301 96 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 SNORA36.1-201ENST00000363424 132 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 RNY1P2-201ENST00000364820 117 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 RNU6-449P-201ENST00000383914 107 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
TM4SF1P30408 SUMO1P3-201ENST00000439961 304 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 RNU6-182P-201ENST00000516970 105 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 RNA5SP47-201ENST00000517230 109 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 AC138749.4-201ENST00000563970 127 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 AL137067.1-201ENST00000615933 120 ntBASIC0.26□□□□□ -2.37
TM4SF1P30408 Y_RNA.56-201ENST00000362798 112 ntBASIC0.25□□□□□ -2.37
TM4SF1P30408 RNU6-682P-201ENST00000363843 106 ntBASIC0.25□□□□□ -2.37
TM4SF1P30408 Y_RNA.366-201ENST00000365540 102 ntBASIC0.25□□□□□ -2.37
TM4SF1P30408 SNORD28-201ENST00000384706 75 ntBASIC0.25□□□□□ -2.37
TM4SF1P30408 AC004792.1-201ENST00000614523 137 ntBASIC0.25□□□□□ -2.37
TM4SF1P30408 RNU6-429P-201ENST00000384582 108 ntBASIC0.24□□□□□ -2.37
TM4SF1P30408 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.24□□□□□ -2.37
TM4SF1P30408 Y_RNA.651-201ENST00000459380 103 ntBASIC0.24□□□□□ -2.37
TM4SF1P30408 AC138869.1-201ENST00000568623 124 ntBASIC0.24□□□□□ -2.37
TM4SF1P30408 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
TM4SF1P30408 AC105081.1-201ENST00000617727 106 ntBASIC0.24□□□□□ -2.37
TM4SF1P30408 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.24□□□□□ -2.37
TM4SF1P30408 RNU6-151P-201ENST00000364158 107 ntBASIC0.23□□□□□ -2.37
TM4SF1P30408 RNU6-309P-201ENST00000364573 106 ntBASIC0.23□□□□□ -2.37
TM4SF1P30408 MIR329-2-201ENST00000385029 84 ntBASIC0.23□□□□□ -2.37
TM4SF1P30408 Y_RNA.692-201ENST00000516627 105 ntBASIC0.23□□□□□ -2.37
TM4SF1P30408 Y_RNA.778-201ENST00000620203 90 ntBASIC0.23□□□□□ -2.37
TM4SF1P30408 AC244669.1-204ENST00000621564 178 ntBASIC0.23□□□□□ -2.37
TM4SF1P30408 MIR6828-201ENST00000636181 60 ntBASIC0.23□□□□□ -2.37
TM4SF1P30408 Y_RNA.98-201ENST00000363109 102 ntBASIC0.22□□□□□ -2.37
TM4SF1P30408 Y_RNA.294-201ENST00000364916 102 ntBASIC0.22□□□□□ -2.37
TM4SF1P30408 MIR548L-201ENST00000408303 86 ntBASIC0.22□□□□□ -2.37
TM4SF1P30408 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms