Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 SNORD77B-201ENST00000391112 67 ntBASIC0.37□□□□□ -2.35
SMIM18P0DKX4 SNORA68.3-201ENST00000515906 83 ntBASIC0.37□□□□□ -2.35
SMIM18P0DKX4 MIR6734-201ENST00000621166 68 ntBASIC0.37□□□□□ -2.35
SMIM18P0DKX4 MIR6828-201ENST00000636181 60 ntBASIC0.37□□□□□ -2.35
SMIM18P0DKX4 U6.109-201ENST00000636749 87 ntBASIC0.37□□□□□ -2.35
SMIM18P0DKX4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
SMIM18P0DKX4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.36□□□□□ -2.35
SMIM18P0DKX4 SNORD44.1-201ENST00000363202 61 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 Y_RNA.180-201ENST00000363867 113 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 Y_RNA.215-201ENST00000364204 112 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 RNU6-42P-201ENST00000384165 107 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 Y_RNA.567-201ENST00000384736 106 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 MIR548J-201ENST00000408833 112 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 SNORD71-201ENST00000411292 86 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 RNU6-863P-201ENST00000515989 104 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 AP001328.1-201ENST00000528550 176 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.36□□□□□ -2.35
SMIM18P0DKX4 MIR3671-201ENST00000580455 88 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 MIR4639-201ENST00000584938 69 ntBASIC0.36□□□□□ -2.35
SMIM18P0DKX4 RNU6-647P-201ENST00000364243 107 ntBASIC0.35□□□□□ -2.35
SMIM18P0DKX4 SNORD28-201ENST00000384706 75 ntBASIC0.35□□□□□ -2.35
SMIM18P0DKX4 AC114737.2-201ENST00000421583 173 ntBASIC0.35□□□□□ -2.35
SMIM18P0DKX4 RNU5E-3P-201ENST00000515913 68 ntBASIC0.35□□□□□ -2.35
SMIM18P0DKX4 RNU6-1212P-201ENST00000517023 104 ntBASIC0.35□□□□□ -2.35
SMIM18P0DKX4 RNA5SP47-201ENST00000517230 109 ntBASIC0.35□□□□□ -2.35
SMIM18P0DKX4 AC105081.1-201ENST00000617727 106 ntBASIC0.35□□□□□ -2.35
SMIM18P0DKX4 Y_RNA.8-201ENST00000362353 102 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.98-201ENST00000363109 102 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.114-201ENST00000363265 113 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.280-201ENST00000364765 112 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 MIR206-201ENST00000384872 86 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 RNU6-1321P-201ENST00000390905 107 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 SCARNA16.5-201ENST00000517114 183 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 IGKV1-22-201ENST00000524313 326 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 AC022523.2-201ENST00000561045 150 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 MIR4714-201ENST00000580728 77 ntBASIC0.34□□□□□ -2.36
SMIM18P0DKX4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.34□□□□□ -2.36
SMIM18P0DKX4 MIR101-2-201ENST00000362195 79 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.420-201ENST00000384043 110 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 MIR569-201ENST00000385228 96 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 MIR1287-201ENST00000408492 90 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 RNA5SP136-201ENST00000410906 107 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 RNU7-48P-201ENST00000458875 63 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 RN7SKP19-201ENST00000516016 252 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 RNA5SP268-201ENST00000516828 124 ntBASIC0.33□□□□□ -2.36
SMIM18P0DKX4 RNU6-1099P-201ENST00000363533 107 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 RNA5SP245-201ENST00000364239 121 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 RNU6-1229P-201ENST00000364295 107 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 SNORD115-35-201ENST00000365122 82 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 MIR518E-201ENST00000385252 88 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 RNU7-2P-201ENST00000516096 62 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 MTND5P41-201ENST00000517498 206 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 U7.2-201ENST00000607576 63 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 AC021753.1-201ENST00000635724 168 ntBASIC0.32□□□□□ -2.36
SMIM18P0DKX4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 RNU2-59P-201ENST00000410482 191 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 RNA5SP247-201ENST00000411181 105 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 AC092628.1-201ENST00000436250 252 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 AL158147.1-201ENST00000443970 75 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 AC244505.6-201ENST00000452829 130 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 AC138869.1-201ENST00000568623 124 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 MIR548H5-201ENST00000580314 60 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 RNU7-10P-201ENST00000607194 63 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 AC087741.2-201ENST00000619415 172 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 AC091304.10-201ENST00000641554 121 ntBASIC0.31□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.198-201ENST00000364013 98 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.226-201ENST00000364337 114 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.328-201ENST00000365208 113 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.488-201ENST00000384403 102 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 MIR6513-201ENST00000621188 64 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 AC244669.1-204ENST00000621564 178 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 AC243829.3-201ENST00000622177 108 ntBASIC0.3□□□□□ -2.36
SMIM18P0DKX4 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 SNORD115-19-201ENST00000363098 82 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 SNORD115-18-201ENST00000363293 82 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.127-201ENST00000363386 109 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.170-201ENST00000363746 110 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 SNORD115-17-201ENST00000364612 82 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 Y_RNA.448-201ENST00000384185 108 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNU6-616P-201ENST00000384353 107 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNU6-848P-201ENST00000515948 107 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNU7-200P-201ENST00000516105 62 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNU6-617P-201ENST00000516147 107 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNU6-473P-201ENST00000516164 107 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 RNU6-229P-201ENST00000516614 102 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 MIR3163-201ENST00000581592 73 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 AP001362.1-201ENST00000625165 124 ntBASIC0.29□□□□□ -2.36
SMIM18P0DKX4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.29□□□□□ -2.36
SMIM18P0DKX4 MT-TI-201ENST00000387365 69 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 MIR759-201ENST00000390224 91 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 MIR548I2-201ENST00000408348 149 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.28□□□□□ -2.36
SMIM18P0DKX4 RNU7-6P-201ENST00000516845 62 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms