Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 RNU6-1321P-201ENST00000390905 107 ntBASIC1.02□□□□□ -2.25
MT-CO1P00395 SNORD99-201ENST00000408612 74 ntBASIC1.02□□□□□ -2.25
MT-CO1P00395 RNU7-48P-201ENST00000458875 63 ntBASIC1.02□□□□□ -2.25
MT-CO1P00395 Y_RNA.649-201ENST00000459077 103 ntBASIC1.02□□□□□ -2.25
MT-CO1P00395 AC138749.4-201ENST00000563970 127 ntBASIC1.02□□□□□ -2.25
MT-CO1P00395 Y_RNA.13-201ENST00000362403 112 ntBASIC1.01□□□□□ -2.25
MT-CO1P00395 Y_RNA.98-201ENST00000363109 102 ntBASIC1.01□□□□□ -2.25
MT-CO1P00395 RNU4-58P-201ENST00000363192 141 ntBASIC1.01□□□□□ -2.25
MT-CO1P00395 Y_RNA.448-201ENST00000384185 108 ntBASIC1.01□□□□□ -2.25
MT-CO1P00395 Y_RNA.773-201ENST00000607168 90 ntBASIC1.01□□□□□ -2.25
MT-CO1P00395 AL365222.1-201ENST00000614661 98 ntBASIC1.01□□□□□ -2.25
MT-CO1P00395 RNA5SP133-201ENST00000363368 119 ntBASIC1□□□□□ -2.25
MT-CO1P00395 RNA5SP205-201ENST00000364653 136 ntBASIC1□□□□□ -2.25
MT-CO1P00395 RNU4-45P-201ENST00000365469 141 ntBASIC1□□□□□ -2.25
MT-CO1P00395 Y_RNA.362-201ENST00000365518 110 ntBASIC1□□□□□ -2.25
MT-CO1P00395 MIR548A3-201ENST00000385297 97 ntBASIC1□□□□□ -2.25
MT-CO1P00395 RPL39P34-201ENST00000477141 156 ntBASIC1□□□□□ -2.25
MT-CO1P00395 RNU6-448P-201ENST00000517052 107 ntBASIC1□□□□□ -2.25
MT-CO1P00395 AC008608.1-201ENST00000603910 127 ntBASIC1□□□□□ -2.25
MT-CO1P00395 AC105081.1-201ENST00000617727 106 ntBASIC1□□□□□ -2.25
MT-CO1P00395 AP001362.1-201ENST00000625165 124 ntBASIC1□□□□□ -2.25
MT-CO1P00395 U6.109-201ENST00000636749 87 ntBASIC1□□□□□ -2.25
MT-CO1P00395 Y_RNA.191-201ENST00000363972 113 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 Y_RNA.261-201ENST00000364631 102 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 RNU6-865P-201ENST00000364772 107 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 Y_RNA.344-201ENST00000365381 112 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 SNORA72.6-201ENST00000384520 129 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 SNORD100-201ENST00000408573 76 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 AC244098.3-201ENST00000424803 96 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 RNU6-313P-201ENST00000516317 112 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 MIR4452-201ENST00000583004 71 ntBASIC0.99□□□□□ -2.25
MT-CO1P00395 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.99□□□□□ -2.25
MT-CO1P00395 MIR373-201ENST00000362273 69 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 RNU6-834P-201ENST00000362367 110 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 RNU6-363P-201ENST00000362895 105 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 Y_RNA.328-201ENST00000365208 113 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 MIR520E-201ENST00000384867 87 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 MIR1912-201ENST00000410389 80 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 SNORA25.16-201ENST00000516741 121 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.98□□□□□ -2.25
MT-CO1P00395 AC007012.1-201ENST00000567192 175 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 AC211469.2-201ENST00000605461 205 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 MIR1255B1-201ENST00000636325 63 ntBASIC0.98□□□□□ -2.25
MT-CO1P00395 Y_RNA.85-201ENST00000363014 111 ntBASIC0.97□□□□□ -2.25
MT-CO1P00395 RNU4-67P-201ENST00000364569 141 ntBASIC0.97□□□□□ -2.25
MT-CO1P00395 Y_RNA.507-201ENST00000384500 99 ntBASIC0.97□□□□□ -2.25
MT-CO1P00395 RNU6-429P-201ENST00000384582 108 ntBASIC0.97□□□□□ -2.25
MT-CO1P00395 RNU2-51P-201ENST00000410708 197 ntBASIC0.97□□□□□ -2.25
MT-CO1P00395 MIR3973-201ENST00000579824 107 ntBASIC0.97□□□□□ -2.25
MT-CO1P00395 AL162726.3-218ENST00000636401 95 ntBASIC0.97□□□□□ -2.25
MT-CO1P00395 Y_RNA.119-201ENST00000363301 96 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 RNU6-110P-201ENST00000384508 104 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 RNU6-1154P-201ENST00000391001 104 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 RNU6-1307P-201ENST00000391012 103 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 ACA64.5-201ENST00000516207 127 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 RNU6-1018P-201ENST00000516577 106 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 RNU6-521P-201ENST00000516663 105 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 DEFB131E-201ENST00000532329 154 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 AC011195.1-201ENST00000578177 177 ntBASIC0.96□□□□□ -2.26
MT-CO1P00395 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.96□□□□□ -2.26
MT-CO1P00395 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
MT-CO1P00395 Y_RNA.224-201ENST00000364308 111 ntBASIC0.95□□□□□ -2.26
MT-CO1P00395 RNU6-880P-201ENST00000384526 107 ntBASIC0.95□□□□□ -2.26
MT-CO1P00395 AC002350.1-201ENST00000490759 375 ntBASIC0.95□□□□□ -2.26
MT-CO1P00395 RNU6-531P-201ENST00000516694 104 ntBASIC0.95□□□□□ -2.26
MT-CO1P00395 Y_RNA.309-201ENST00000365046 111 ntBASIC0.94□□□□□ -2.26
MT-CO1P00395 MIR532-201ENST00000385025 91 ntBASIC0.94□□□□□ -2.26
MT-CO1P00395 RPS29P1-201ENST00000465274 159 ntBASIC0.94□□□□□ -2.26
MT-CO1P00395 MIR376B-201ENST00000614515 100 ntBASIC0.94□□□□□ -2.26
MT-CO1P00395 RNU6-1313P-201ENST00000362622 102 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 Y_RNA.174-201ENST00000363781 105 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 MIR4698-201ENST00000577795 80 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 MIR3612-201ENST00000579753 87 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 AC103810.9-201ENST00000606688 112 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 AL035470.1-201ENST00000622571 220 ntBASIC0.93□□□□□ -2.26
MT-CO1P00395 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
MT-CO1P00395 Y_RNA.281-201ENST00000364774 94 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 RNU6-409P-201ENST00000384114 104 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 RNU6-1144P-201ENST00000384247 104 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 Y_RNA.536-201ENST00000384621 113 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 MIR548A1-201ENST00000385041 97 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 MIR605-201ENST00000385078 83 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 RNU6-816P-201ENST00000390914 107 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 RNU6-1268P-201ENST00000391214 107 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 RNU6-1239P-201ENST00000391310 107 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 AL606753.1-201ENST00000427435 87 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 Y_RNA.697-201ENST00000516776 113 ntBASIC0.92□□□□□ -2.26
MT-CO1P00395 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
MT-CO1P00395 HSBP1P2-201ENST00000299671 229 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 RNU6-1187P-201ENST00000364771 110 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 Y_RNA.360-201ENST00000365512 102 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 SNORD38.2-201ENST00000384470 69 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 SNORD116-21-201ENST00000384507 92 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 RNU6-1081P-201ENST00000384537 107 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 RNU6-476P-201ENST00000384726 107 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 PSMC1P5-201ENST00000512850 177 ntBASIC0.91□□□□□ -2.26
MT-CO1P00395 RNU6-135P-201ENST00000516769 101 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms