Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RNU6-580P-201ENST00000365159 107 ntBASIC2.19□□□□□ -2.06
USP17L3A6NCW0 RNA5SP489-201ENST00000410986 109 ntBASIC2.19□□□□□ -2.06
USP17L3A6NCW0 AC090255.1-201ENST00000495779 349 ntBASIC2.19□□□□□ -2.06
USP17L3A6NCW0 MIR4500-201ENST00000579472 76 ntBASIC2.19□□□□□ -2.06
USP17L3A6NCW0 MIR4668-201ENST00000582284 70 ntBASIC2.19□□□□□ -2.06
USP17L3A6NCW0 AP000553.5-201ENST00000641933 54 ntBASIC2.19□□□□□ -2.06
USP17L3A6NCW0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USP17L3A6NCW0 RNU6-53P-201ENST00000365367 106 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 SNORA2B-201ENST00000384583 137 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 RNU1-78P-201ENST00000391248 165 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 RNU4-62P-201ENST00000410125 130 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 SNRPGP12-201ENST00000449481 213 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 RN7SKP88-201ENST00000516847 250 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 7SK.8-201ENST00000612110 250 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 uc_338.6-201ENST00000613544 171 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 7SK.11-201ENST00000615477 250 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 7SK.13-201ENST00000622040 250 ntBASIC2.18□□□□□ -2.06
USP17L3A6NCW0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
USP17L3A6NCW0 AC008163.1-202ENST00000636004 2889 ntBASIC2.17□□□□□ -2.06
USP17L3A6NCW0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.17□□□□□ -2.06
USP17L3A6NCW0 RNU6-1054P-201ENST00000411293 104 ntBASIC2.17□□□□□ -2.06
USP17L3A6NCW0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.17□□□□□ -2.06
USP17L3A6NCW0 AC022137.1-201ENST00000483735 151 ntBASIC2.17□□□□□ -2.06
USP17L3A6NCW0 AC079804.2-201ENST00000490376 200 ntBASIC2.17□□□□□ -2.06
USP17L3A6NCW0 MIR4255-201ENST00000579351 72 ntBASIC2.17□□□□□ -2.06
USP17L3A6NCW0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
USP17L3A6NCW0 RNU6-571P-201ENST00000384128 107 ntBASIC2.16□□□□□ -2.06
USP17L3A6NCW0 RNU6-242P-201ENST00000384359 107 ntBASIC2.16□□□□□ -2.06
USP17L3A6NCW0 MIR181B2-201ENST00000385004 89 ntBASIC2.16□□□□□ -2.06
USP17L3A6NCW0 SNORA67.5-201ENST00000391036 107 ntBASIC2.16□□□□□ -2.06
USP17L3A6NCW0 AP1B1P2-201ENST00000416196 106 ntBASIC2.16□□□□□ -2.06
USP17L3A6NCW0 RPS27P16-201ENST00000425758 201 ntBASIC2.16□□□□□ -2.06
USP17L3A6NCW0 MIR514B-201ENST00000516774 80 ntBASIC2.16□□□□□ -2.06
USP17L3A6NCW0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.15□□□□□ -2.06
USP17L3A6NCW0 RNU6-219P-201ENST00000364728 107 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 RNA5SP37-201ENST00000365420 130 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 RNU6-321P-201ENST00000410912 106 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 Y_RNA.620-201ENST00000411009 88 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 RNU6-592P-201ENST00000411333 103 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 AP003327.1-201ENST00000529684 127 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 AL513043.2-201ENST00000573941 143 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 MIR4303-201ENST00000581299 66 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 MIR502-201ENST00000606349 86 ntBASIC2.15□□□□□ -2.07
USP17L3A6NCW0 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USP17L3A6NCW0 RNY1P4-201ENST00000384595 115 ntBASIC2.14□□□□□ -2.07
USP17L3A6NCW0 SNORD93-201ENST00000408813 74 ntBASIC2.14□□□□□ -2.07
USP17L3A6NCW0 Y_RNA.609-201ENST00000410669 89 ntBASIC2.14□□□□□ -2.07
USP17L3A6NCW0 MIR8066-201ENST00000617280 78 ntBASIC2.14□□□□□ -2.07
USP17L3A6NCW0 AC025521.1-201ENST00000621624 286 ntBASIC2.14□□□□□ -2.07
USP17L3A6NCW0 MIR1245B-201ENST00000636115 69 ntBASIC2.14□□□□□ -2.07
USP17L3A6NCW0 Y_RNA.57-201ENST00000362806 113 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 Y_RNA.219-201ENST00000364232 113 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 Y_RNA.330-201ENST00000365230 109 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 RNU6-573P-201ENST00000383938 106 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 MIR934-201ENST00000401241 83 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 AC048334.1-201ENST00000477975 159 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 SNORA31.2-201ENST00000516019 134 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 RNU6-850P-201ENST00000516934 103 ntBASIC2.13□□□□□ -2.07
USP17L3A6NCW0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.13□□□□□ -2.07
USP17L3A6NCW0 Y_RNA.73-201ENST00000362910 113 ntBASIC2.12□□□□□ -2.07
USP17L3A6NCW0 RNU4-58P-201ENST00000363192 141 ntBASIC2.12□□□□□ -2.07
USP17L3A6NCW0 SNORA16.1-201ENST00000364597 132 ntBASIC2.12□□□□□ -2.07
USP17L3A6NCW0 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.12□□□□□ -2.07
USP17L3A6NCW0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
USP17L3A6NCW0 SNORD113.3-201ENST00000364630 78 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 RNU1-36P-201ENST00000365130 165 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 MIR1257-201ENST00000408490 117 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 MIR1287-201ENST00000408492 90 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 BX276092.1-201ENST00000427368 251 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 RNU6-267P-201ENST00000516714 103 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 RNU6-902P-201ENST00000517212 91 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 MIR4491-201ENST00000581087 68 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 AL359821.1-201ENST00000605519 182 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.11□□□□□ -2.07
USP17L3A6NCW0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.11□□□□□ -2.07
USP17L3A6NCW0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
USP17L3A6NCW0 MIR337-201ENST00000362281 93 ntBASIC2.1□□□□□ -2.07
USP17L3A6NCW0 SNORA72.6-201ENST00000384520 129 ntBASIC2.1□□□□□ -2.07
USP17L3A6NCW0 AL161932.1-201ENST00000437408 146 ntBASIC2.1□□□□□ -2.07
USP17L3A6NCW0 AC023934.1-201ENST00000574529 2389 ntBASIC2.09□□□□□ -2.07
USP17L3A6NCW0 RNU6-497P-201ENST00000365316 104 ntBASIC2.09□□□□□ -2.07
USP17L3A6NCW0 Y_RNA.588-201ENST00000391254 102 ntBASIC2.09□□□□□ -2.07
USP17L3A6NCW0 AC020891.4-201ENST00000605745 93 ntBASIC2.09□□□□□ -2.07
USP17L3A6NCW0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
USP17L3A6NCW0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.08□□□□□ -2.08
USP17L3A6NCW0 RNU6-403P-201ENST00000363163 104 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 SNORA75.2-201ENST00000391138 150 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 SNORA75.3-201ENST00000391231 150 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 RNU4-83P-201ENST00000410863 133 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 RNU7-185P-201ENST00000459215 60 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 TRMT112P2-201ENST00000512910 132 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 RNU6-531P-201ENST00000516694 104 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 MIR5588-201ENST00000581890 63 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 MIR3202-2-201ENST00000635980 79 ntBASIC2.08□□□□□ -2.08
USP17L3A6NCW0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
USP17L3A6NCW0 RNU6-1276P-201ENST00000365372 104 ntBASIC2.07□□□□□ -2.08
USP17L3A6NCW0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
USP17L3A6NCW0 RNU6-519P-201ENST00000410590 108 ntBASIC2.07□□□□□ -2.08
USP17L3A6NCW0 SNORA25.16-201ENST00000516741 121 ntBASIC2.07□□□□□ -2.08
USP17L3A6NCW0 MIR4419B-201ENST00000577260 68 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 231.1 ms