Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU6-349P-201ENST00000362402 107 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-818P-201ENST00000364837 108 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-1219P-201ENST00000516143 112 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 SNORA31.14-201ENST00000516728 116 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-765P-201ENST00000516916 99 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 AC022559.1-201ENST00000520905 205 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 MIR4719-201ENST00000585233 84 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 AC099654.10-201ENST00000640395 161 ntBASIC0.26□□□□□ -2.37
ATG4BQ9Y4P1 SNORD44.1-201ENST00000363202 61 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 SNORD118-201ENST00000363593 134 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 RNA5SP457-201ENST00000363657 124 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.435-201ENST00000384095 112 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-291P-201ENST00000384720 107 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-535P-201ENST00000384722 107 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 SNORA62.5-201ENST00000516634 120 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.25□□□□□ -2.37
ATG4BQ9Y4P1 MIR330-201ENST00000362196 94 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.233-201ENST00000364407 101 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.337-201ENST00000365312 102 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 RNA5SP236-201ENST00000516169 116 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 AC130289.1-201ENST00000577321 73 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 MIR6844-201ENST00000637122 62 ntBASIC0.24□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.85-201ENST00000363014 111 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-312P-201ENST00000364629 107 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-463P-201ENST00000384340 107 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 SUMO1P3-201ENST00000439961 304 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-240P-201ENST00000516098 97 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-531P-201ENST00000516694 104 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNA5SP268-201ENST00000516828 124 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 RNU7-35P-201ENST00000517174 62 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 AC009779.6-201ENST00000603972 165 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 U6.109-201ENST00000636749 87 ntBASIC0.23□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 RNA5SP133-201ENST00000363368 119 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.144-201ENST00000363521 113 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.357-201ENST00000365487 109 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.489-201ENST00000384410 101 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 SNORA75.5-201ENST00000391291 81 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 RNU6-588P-201ENST00000410281 105 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.793-201ENST00000411222 111 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 MIR4305-201ENST00000583252 102 ntBASIC0.22□□□□□ -2.37
ATG4BQ9Y4P1 Y_RNA.274-201ENST00000364714 101 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 RNU6-716P-201ENST00000365621 103 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 SNORD37.2-201ENST00000391075 66 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 AC073261.1-201ENST00000429409 121 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 MTATP6P21-201ENST00000440681 189 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 RNA5SP227-201ENST00000516184 113 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 RNU6-135P-201ENST00000516769 101 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 RNA5SP330-201ENST00000517096 96 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 MIR548AE2-201ENST00000583456 67 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 AL353621.2-201ENST00000605340 133 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 AC078938.1-201ENST00000620993 318 ntBASIC0.21□□□□□ -2.38
ATG4BQ9Y4P1 RNU4-58P-201ENST00000363192 141 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 Y_RNA.297-201ENST00000364950 91 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 Y_RNA.497-201ENST00000384447 98 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 MIR1197-201ENST00000408818 88 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 RNU2-35P-201ENST00000516446 142 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 SNORD67.1-201ENST00000516618 108 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 AC138907.4-201ENST00000570107 226 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 AC021443.1-201ENST00000604478 211 ntBASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.2□□□□□ -2.38
ATG4BQ9Y4P1 MIR101-2-201ENST00000362195 79 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 Y_RNA.644-201ENST00000459006 113 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 Y_RNA.674-201ENST00000516362 113 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 AC011603.4-201ENST00000611325 277 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 MIR7107-201ENST00000611489 80 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 AC105081.1-201ENST00000617727 106 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 AL109933.3-201ENST00000619095 188 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 MIR3658-201ENST00000636291 56 ntBASIC0.19□□□□□ -2.38
ATG4BQ9Y4P1 SNORD115-2-201ENST00000362842 82 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 Y_RNA.258-201ENST00000364613 105 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 SNORD115-20-201ENST00000365099 82 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 SNORD18B-201ENST00000365659 72 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 RNU6-815P-201ENST00000384080 113 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 AC069271.1-201ENST00000445577 156 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 RNU7-164P-201ENST00000459221 62 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 RNU7-137P-201ENST00000516788 62 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 SCARNA16.5-201ENST00000517114 183 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.18□□□□□ -2.38
ATG4BQ9Y4P1 SNORA63.5-201ENST00000363548 123 ntBASIC0.17□□□□□ -2.38
ATG4BQ9Y4P1 SNORD28-201ENST00000384706 75 ntBASIC0.17□□□□□ -2.38
ATG4BQ9Y4P1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
ATG4BQ9Y4P1 RNU6-239P-201ENST00000390990 99 ntBASIC0.17□□□□□ -2.38
ATG4BQ9Y4P1 RNU2-59P-201ENST00000410482 191 ntBASIC0.17□□□□□ -2.38
ATG4BQ9Y4P1 RNA5SP47-201ENST00000517230 109 ntBASIC0.17□□□□□ -2.38
ATG4BQ9Y4P1 RNU2-60P-201ENST00000517290 128 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms