Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 Y_RNA.644-201ENST00000459006 113 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.674-201ENST00000516362 113 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 RNU2-35P-201ENST00000516446 142 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-531P-201ENST00000516694 104 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-1271P-201ENST00000517049 105 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 RNU7-35P-201ENST00000517174 62 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 AP003327.1-201ENST00000529684 127 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 AC022523.2-201ENST00000561045 150 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 MIR4711-201ENST00000578274 70 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 AC078938.1-201ENST00000620993 318 ntBASIC0.3□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.120-201ENST00000363304 110 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 RNA5SP133-201ENST00000363368 119 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-291P-201ENST00000384720 107 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 SNORD37.2-201ENST00000391075 66 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 SNORA75.5-201ENST00000391291 81 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 SNRPGP12-201ENST00000449481 213 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 MIR4305-201ENST00000583252 102 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 MIR548AE2-201ENST00000583456 67 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 AC105081.1-201ENST00000617727 106 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 U6.109-201ENST00000636749 87 ntBASIC0.29□□□□□ -2.36
VIPAS39Q9H9C1 SNORD114-23-201ENST00000363536 72 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 SNORD118-201ENST00000363593 134 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-379P-201ENST00000363813 104 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 Y_RNA.188-201ENST00000363952 111 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 AL078595.1-201ENST00000404458 226 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 SUMO1P3-201ENST00000439961 304 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-765P-201ENST00000516916 99 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-388P-201ENST00000517012 105 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 RNU6-389P-201ENST00000517048 105 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 AP002392.1-201ENST00000537692 208 ntBASIC0.28□□□□□ -2.36
VIPAS39Q9H9C1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.531-201ENST00000384589 121 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 RNY1P4-201ENST00000384595 115 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 MIR613-201ENST00000385248 95 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 SNORD67.1-201ENST00000516618 108 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 RNA5SP268-201ENST00000516828 124 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 RNU2-60P-201ENST00000517290 128 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 AC138907.4-201ENST00000570107 226 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 AC021443.1-201ENST00000604478 211 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 PVT1_3.1-201ENST00000620853 95 ntBASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.27□□□□□ -2.37
VIPAS39Q9H9C1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 RNU6-239P-201ENST00000390990 99 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 RNU7-164P-201ENST00000459221 62 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 RNU5E-3P-201ENST00000515913 68 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 AL359881.1-201ENST00000602916 267 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 AC141273.2-201ENST00000618989 130 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 MIR7111-201ENST00000619751 72 ntBASIC0.26□□□□□ -2.37
VIPAS39Q9H9C1 SNORD115-2-201ENST00000362842 82 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 RNA5SP62-201ENST00000363457 110 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 SNORA63.5-201ENST00000363548 123 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 RNU4-84P-201ENST00000364200 139 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 RNA5SP245-201ENST00000364239 121 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 RNU6-309P-201ENST00000364573 106 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 SNORD115-20-201ENST00000365099 82 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 MTATP6P21-201ENST00000440681 189 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 RNU6-861P-201ENST00000516745 106 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 RN7SL793P-201ENST00000583259 296 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 AC072026.1-201ENST00000605023 201 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.25□□□□□ -2.37
VIPAS39Q9H9C1 AC090625.1-201ENST00000357130 210 ntBASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 RNU6-1229P-201ENST00000364295 107 ntBASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 SNORD18B-201ENST00000365659 72 ntBASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 AC069271.1-201ENST00000445577 156 ntBASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.686-201ENST00000516548 134 ntBASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 RNU7-137P-201ENST00000516788 62 ntBASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 AC138749.4-201ENST00000563970 127 ntBASIC0.24□□□□□ -2.37
VIPAS39Q9H9C1 RNU4-58P-201ENST00000363192 141 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.366-201ENST00000365540 102 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 RNU6-815P-201ENST00000384080 113 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.584-201ENST00000391090 114 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 AC073261.1-201ENST00000429409 121 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 RNU7-123P-201ENST00000515911 60 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 RNA5SP227-201ENST00000516184 113 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 MIR3646-201ENST00000578301 84 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 DNAJC19P2-201ENST00000593340 302 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 AC011603.4-201ENST00000611325 277 ntBASIC0.23□□□□□ -2.37
VIPAS39Q9H9C1 MIR101-2-201ENST00000362195 79 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.119-201ENST00000363301 96 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 RNU6-1327P-201ENST00000365302 105 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.401-201ENST00000383965 117 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 MIR1270-201ENST00000459320 83 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.651-201ENST00000459380 103 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 RNU6-138P-201ENST00000515952 107 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 Y_RNA.690-201ENST00000516603 95 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 MIR7107-201ENST00000611489 80 ntBASIC0.22□□□□□ -2.37
VIPAS39Q9H9C1 AC244669.1-204ENST00000621564 178 ntBASIC0.22□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms