Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 Y_RNA.651-201ENST00000459380 103 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 RNU6-531P-201ENST00000516694 104 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 RNU7-137P-201ENST00000516788 62 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 AC022559.1-201ENST00000520905 205 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 AC069113.3-201ENST00000521019 150 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 AC138749.4-201ENST00000563970 127 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 MIR548AE2-201ENST00000583456 67 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 AC011603.4-201ENST00000611325 277 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.15□□□□□ -2.39
HDHD3Q9BSH5 RNU6-463P-201ENST00000384340 107 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.531-201ENST00000384589 121 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 RNU6-535P-201ENST00000384722 107 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 SNORA75.5-201ENST00000391291 81 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 MIR936-201ENST00000401264 98 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.793-201ENST00000411222 111 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 AC069271.1-201ENST00000445577 156 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 RPL39P25-201ENST00000449384 154 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 RNU7-113P-201ENST00000459273 62 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 AC107027.2-201ENST00000512197 115 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 RNA5SP33-201ENST00000516687 98 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 RNU6-135P-201ENST00000516769 101 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 MIR4305-201ENST00000583252 102 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 MIR4639-201ENST00000584938 69 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 RNU1-29P-201ENST00000606574 126 ntBASIC0.14□□□□□ -2.39
HDHD3Q9BSH5 RNU6-508P-201ENST00000363231 103 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 RNA5SP62-201ENST00000363457 110 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 RNU6-1020P-201ENST00000363684 107 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.251-201ENST00000364551 99 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 SNORA72.6-201ENST00000384520 129 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 RNU6-588P-201ENST00000410281 105 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 AL022718.1-201ENST00000412004 84 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 SUMO1P3-201ENST00000439961 304 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 SNORD67.1-201ENST00000516618 108 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 MIR3646-201ENST00000578301 84 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 AC141273.2-201ENST00000618989 130 ntBASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.13□□□□□ -2.39
HDHD3Q9BSH5 RNA5SP133-201ENST00000363368 119 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 RNU4-84P-201ENST00000364200 139 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 RNU6-818P-201ENST00000364837 108 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.337-201ENST00000365312 102 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 RNU6-1126P-201ENST00000384002 107 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 RNA5SP299-201ENST00000391203 116 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 MIR1287-201ENST00000408492 90 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 RNU6-469P-201ENST00000516253 101 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.697-201ENST00000516776 113 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 AC112693.2-201ENST00000556538 232 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 AC244669.1-204ENST00000621564 178 ntBASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.12□□□□□ -2.39
HDHD3Q9BSH5 SNORD114-10-201ENST00000363409 72 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 RNU6-690P-201ENST00000365242 106 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 SNORA32-201ENST00000384072 121 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 RNU6-239P-201ENST00000390990 99 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 RNA5SP436-201ENST00000516020 115 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 RNU6-240P-201ENST00000516098 97 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 TUG1_4.1-201ENST00000619464 181 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 MIR3658-201ENST00000636291 56 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 MIR4315-1-201ENST00000636800 73 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 MIR4315-2-201ENST00000640925 73 ntBASIC0.11□□□□□ -2.39
HDHD3Q9BSH5 SNORA42.1-201ENST00000363515 137 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.144-201ENST00000363521 113 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 SNORD114-23-201ENST00000363536 72 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 SNORA63.5-201ENST00000363548 123 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.240-201ENST00000364469 95 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 RNU6-187P-201ENST00000384139 106 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 MIR518E-201ENST00000385252 88 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 AC244505.6-201ENST00000452829 130 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 RNU7-123P-201ENST00000515911 60 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 RNU6-848P-201ENST00000515948 107 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 RNU6-617P-201ENST00000516147 107 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 RNU6-473P-201ENST00000516164 107 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 MIR6515-201ENST00000619843 57 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 U6.109-201ENST00000636749 87 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 AC091304.10-201ENST00000641554 121 ntBASIC0.1□□□□□ -2.39
HDHD3Q9BSH5 Y_RNA.56-201ENST00000362798 112 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 RNU4-58P-201ENST00000363192 141 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 Y_RNA.119-201ENST00000363301 96 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 Y_RNA.441-201ENST00000384123 112 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 AC108059.2-201ENST00000434626 151 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 Y_RNA.644-201ENST00000459006 113 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 Y_RNA.674-201ENST00000516362 113 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 AC072026.1-201ENST00000605023 201 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 AC098479.1-201ENST00000609225 154 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 MIR6844-201ENST00000637122 62 ntBASIC0.09□□□□□ -2.4
HDHD3Q9BSH5 Y_RNA.116-201ENST00000363292 103 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 RNU6-379P-201ENST00000363813 104 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 RNU6-309P-201ENST00000364573 106 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 RNY1P2-201ENST00000364820 117 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 RNU6-1318P-201ENST00000365389 103 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 MIRLET7F2-201ENST00000385277 83 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 AC073261.1-201ENST00000429409 121 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 RNA5SP227-201ENST00000516184 113 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 SNORA62.5-201ENST00000516634 120 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 AC138907.4-201ENST00000570107 226 ntBASIC0.08□□□□□ -2.4
HDHD3Q9BSH5 RNU6-682P-201ENST00000363843 106 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 247.1 ms