Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 RNU7-21P-201ENST00000459430 62 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 SNORD79.1-201ENST00000516069 84 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 FAM71BP1-201ENST00000604431 523 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 MIR6504-201ENST00000613520 61 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 AL162726.3-218ENST00000636401 95 ntBASIC1.49□□□□□ -2.17
RTF1Q92541 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.48□□□□□ -2.17
RTF1Q92541 SNORA63.5-201ENST00000363548 123 ntBASIC1.48□□□□□ -2.17
RTF1Q92541 RNU6-42P-201ENST00000384165 107 ntBASIC1.48□□□□□ -2.17
RTF1Q92541 RNU6-1165P-201ENST00000410119 107 ntBASIC1.48□□□□□ -2.17
RTF1Q92541 MIR1912-201ENST00000410389 80 ntBASIC1.48□□□□□ -2.17
RTF1Q92541 MRPL35P3-201ENST00000421557 364 ntBASIC1.48□□□□□ -2.17
RTF1Q92541 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
RTF1Q92541 Y_RNA.773-201ENST00000607168 90 ntBASIC1.48□□□□□ -2.17
RTF1Q92541 SNORD113.3-201ENST00000364630 78 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 RNU6-1107P-201ENST00000364817 104 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 RNY1P13-201ENST00000365030 105 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 Y_RNA.330-201ENST00000365230 109 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 RNU6-616P-201ENST00000384353 107 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 MT-TF-201ENST00000387314 71 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 SNORA70.22-201ENST00000517160 124 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.47□□□□□ -2.17
RTF1Q92541 AL078603.1-201ENST00000603824 313 ntBASIC1.47□□□□□ -2.17
RTF1Q92541 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
RTF1Q92541 MIR30D-201ENST00000362283 70 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 Y_RNA.81-201ENST00000362997 102 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 SNORD114-10-201ENST00000363409 72 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 RNU6-755P-201ENST00000364400 103 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 Y_RNA.323-201ENST00000365157 109 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 RNU6-949P-201ENST00000384040 107 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 Y_RNA.507-201ENST00000384500 99 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 RNA5SP95-201ENST00000410319 137 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 MIR18B-201ENST00000454574 71 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 RNU7-90P-201ENST00000459216 62 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 AC036111.3-201ENST00000526389 112 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 RNU6-94P-201ENST00000607728 107 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 AC012676.2-201ENST00000619258 186 ntBASIC1.46□□□□□ -2.18
RTF1Q92541 RNU6-363P-201ENST00000362895 105 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 RNU6-44P-201ENST00000384045 107 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 SNORA2B-201ENST00000384583 137 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 SNORD111-201ENST00000408139 94 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 AC068339.1-201ENST00000526965 141 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 SNORA4-201ENST00000584302 138 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 AC106800.4-201ENST00000614905 153 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 MIR1255B1-201ENST00000636325 63 ntBASIC1.45□□□□□ -2.18
RTF1Q92541 RNU4-67P-201ENST00000364569 141 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 U8.6-201ENST00000364939 135 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 SNORA22-201ENST00000383907 134 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-816P-201ENST00000390914 107 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-1268P-201ENST00000391214 107 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-1239P-201ENST00000391310 107 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-447P-201ENST00000410293 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-1118P-201ENST00000410382 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-1076P-201ENST00000410397 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-355P-201ENST00000410427 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-791P-201ENST00000410467 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-705P-201ENST00000410601 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-1100P-201ENST00000410691 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-860P-201ENST00000410860 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-1217P-201ENST00000411276 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU6-785P-201ENST00000411324 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNA5SP220-201ENST00000516298 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 SNORD67.1-201ENST00000516618 108 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 RNU7-137P-201ENST00000516788 62 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 MIR5009-201ENST00000578736 100 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 U6.90-201ENST00000614007 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 U6.70-201ENST00000620287 104 ntBASIC1.44□□□□□ -2.18
RTF1Q92541 MIR96-201ENST00000362288 78 ntBASIC1.43□□□□□ -2.18
RTF1Q92541 SNORD114-27-201ENST00000363766 70 ntBASIC1.43□□□□□ -2.18
RTF1Q92541 SNORD115-35-201ENST00000365122 82 ntBASIC1.43□□□□□ -2.18
RTF1Q92541 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.43□□□□□ -2.18
RTF1Q92541 RNU7-2P-201ENST00000516096 62 ntBASIC1.43□□□□□ -2.18
RTF1Q92541 MIR6734-201ENST00000621166 68 ntBASIC1.43□□□□□ -2.18
RTF1Q92541 RNA5SP327-201ENST00000362494 101 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 Y_RNA.191-201ENST00000363972 113 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 RNU6-1014P-201ENST00000383940 103 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 SNORA25-201ENST00000384384 134 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 MIR206-201ENST00000384872 86 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 MIR222-201ENST00000384992 110 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 RPL39P25-201ENST00000449384 154 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 uc_338.6-201ENST00000613544 171 ntBASIC1.42□□□□□ -2.18
RTF1Q92541 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.42□□□□□ -2.18
RTF1Q92541 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RTF1Q92541 RNU6-409P-201ENST00000384114 104 ntBASIC1.41□□□□□ -2.18
RTF1Q92541 RNU6-939P-201ENST00000384634 107 ntBASIC1.41□□□□□ -2.18
RTF1Q92541 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.41□□□□□ -2.18
RTF1Q92541 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.41□□□□□ -2.18
RTF1Q92541 PDCD5P2-201ENST00000507570 312 ntBASIC1.41□□□□□ -2.18
RTF1Q92541 RNU6-1018P-201ENST00000516577 106 ntBASIC1.41□□□□□ -2.18
RTF1Q92541 Y_RNA.155-201ENST00000363632 101 ntBASIC1.4□□□□□ -2.19
RTF1Q92541 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RTF1Q92541 RNU6-733P-201ENST00000410759 104 ntBASIC1.4□□□□□ -2.19
RTF1Q92541 RNU6-521P-201ENST00000516663 105 ntBASIC1.4□□□□□ -2.19
RTF1Q92541 MIR4452-201ENST00000583004 71 ntBASIC1.4□□□□□ -2.19
RTF1Q92541 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.4□□□□□ -2.19
RTF1Q92541 AC008163.1-202ENST00000636004 2889 ntBASIC1.4□□□□□ -2.19
RTF1Q92541 SNORD114-22-201ENST00000365423 72 ntBASIC1.39□□□□□ -2.19
RTF1Q92541 RNU6-106P-201ENST00000384405 107 ntBASIC1.39□□□□□ -2.19
RTF1Q92541 RNA5SP480-201ENST00000516840 109 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 294.6 ms