Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 RNU6-187P-201ENST00000384139 106 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNY1P6-201ENST00000384193 109 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.521-201ENST00000384560 114 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 SNORD28-201ENST00000384706 75 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNU6-893P-201ENST00000458841 100 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.668-201ENST00000516233 93 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNU6-1232P-201ENST00000516299 86 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNU6-531P-201ENST00000516694 104 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNU7-35P-201ENST00000517174 62 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 RNA5SP47-201ENST00000517230 109 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 MIR7107-201ENST00000611489 80 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 MIR6828-201ENST00000636181 60 ntBASIC0.08□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.52-201ENST00000362760 96 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.515-201ENST00000384535 112 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 RNU6-1011P-201ENST00000384668 107 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.556-201ENST00000384677 113 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 RNU6-918P-201ENST00000391219 106 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 RNU7-113P-201ENST00000459273 62 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 RNU6-327P-201ENST00000516270 127 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.681-201ENST00000516445 113 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 RNA5SP33-201ENST00000516687 98 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 DEFB131E-201ENST00000532329 154 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.07□□□□□ -2.4
TNFRSF9Q07011 SNORD115-2-201ENST00000362842 82 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.75-201ENST00000362927 97 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.120-201ENST00000363304 110 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 RNA5SP133-201ENST00000363368 119 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 SNORD115-20-201ENST00000365099 82 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.350-201ENST00000365409 98 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 SNORA2A-201ENST00000383885 135 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.423-201ENST00000384057 113 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 SNORA32-201ENST00000384072 121 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 RNU6-768P-201ENST00000384683 107 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
TNFRSF9Q07011 AC108059.2-201ENST00000434626 151 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.06□□□□□ -2.4
TNFRSF9Q07011 RNA5SP236-201ENST00000516169 116 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 RNA5SP227-201ENST00000516184 113 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 RNU6-111P-201ENST00000517179 105 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 MIR4752-201ENST00000579672 72 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 MIR5190-201ENST00000581537 80 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.06□□□□□ -2.4
TNFRSF9Q07011 RNU1-29P-201ENST00000606574 126 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 AC062037.2-201ENST00000610137 73 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 AC244669.1-204ENST00000621564 178 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 AC067863.3-201ENST00000624172 122 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 MIR4315-1-201ENST00000636800 73 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 MIR4315-2-201ENST00000640925 73 ntBASIC0.06□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.60-201ENST00000362831 98 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 SNORA63.5-201ENST00000363548 123 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 RNU6-1229P-201ENST00000364295 107 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.366-201ENST00000365540 102 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 RNU6-47P-201ENST00000383866 107 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 PCNPP3-201ENST00000393579 471 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 MIR1302-3-201ENST00000408128 138 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 AL022718.1-201ENST00000412004 84 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 RNU6-1194P-201ENST00000516208 104 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 RNU4-71P-201ENST00000516258 113 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 RNU2-35P-201ENST00000516446 142 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 MIR4639-201ENST00000584938 69 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 AL359881.1-201ENST00000602916 267 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 U6.109-201ENST00000636749 87 ntBASIC0.05□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.49-201ENST00000362714 112 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 RNA5SP214-201ENST00000363378 118 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.280-201ENST00000364765 112 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.478-201ENST00000384358 107 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.531-201ENST00000384589 121 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 MIR548H2-201ENST00000408874 88 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 AL118496.2-201ENST00000448300 230 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 SCARNA15.1-201ENST00000516384 125 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 SNORD67.1-201ENST00000516618 108 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 RNU6-135P-201ENST00000516769 101 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 AC138749.4-201ENST00000563970 127 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 MIR548AE2-201ENST00000583456 67 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 AC105081.1-201ENST00000617727 106 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 AC091304.10-201ENST00000641554 121 ntBASIC0.04□□□□□ -2.4
TNFRSF9Q07011 RNU4-58P-201ENST00000363192 141 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.119-201ENST00000363301 96 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 SNORA20.1-201ENST00000364790 130 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 RNU6-690P-201ENST00000365242 106 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 RNU6-1126P-201ENST00000384002 107 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.447-201ENST00000384184 113 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 RNU6-588P-201ENST00000410281 105 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 Y_RNA.793-201ENST00000411222 111 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 MIR1270-201ENST00000459320 83 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 RNU6-1023P-201ENST00000516137 106 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 RNU7-137P-201ENST00000516788 62 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 MIR4667-201ENST00000578933 66 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 MIR4503-201ENST00000582187 83 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 MIR4305-201ENST00000583252 102 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 MIR3149-201ENST00000584629 83 ntBASIC0.03□□□□□ -2.4
TNFRSF9Q07011 MIR411-201ENST00000362239 96 ntBASIC0.02□□□□□ -2.41
TNFRSF9Q07011 SNORA9.1-201ENST00000362412 131 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms