Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AC243829.6-201ENST00000612652 106 ntBASIC0.34□□□□□ -2.36
PLOD3O60568 RNU6-349P-201ENST00000362402 107 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 RNU6-1327P-201ENST00000365302 105 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 Y_RNA.435-201ENST00000384095 112 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 MIR518A1-201ENST00000385068 85 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 Y_RNA.588-201ENST00000391254 102 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 Y_RNA.793-201ENST00000411222 111 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 Y_RNA.644-201ENST00000459006 113 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 Y_RNA.674-201ENST00000516362 113 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 SNORA25.16-201ENST00000516741 121 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 Y_RNA.697-201ENST00000516776 113 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 AC022523.2-201ENST00000561045 150 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 AC078938.1-201ENST00000620993 318 ntBASIC0.33□□□□□ -2.36
PLOD3O60568 SNORA75.5-201ENST00000391291 81 ntBASIC0.32□□□□□ -2.36
PLOD3O60568 AL512326.2-201ENST00000426359 151 ntBASIC0.32□□□□□ -2.36
PLOD3O60568 RNU6-240P-201ENST00000516098 97 ntBASIC0.32□□□□□ -2.36
PLOD3O60568 AP002392.1-201ENST00000537692 208 ntBASIC0.32□□□□□ -2.36
PLOD3O60568 MTND5P34-201ENST00000568888 325 ntBASIC0.32□□□□□ -2.36
PLOD3O60568 MIR1273G-201ENST00000577677 100 ntBASIC0.32□□□□□ -2.36
PLOD3O60568 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.32□□□□□ -2.36
PLOD3O60568 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
PLOD3O60568 SNORD18B-201ENST00000365659 72 ntBASIC0.31□□□□□ -2.36
PLOD3O60568 MTATP6P21-201ENST00000440681 189 ntBASIC0.31□□□□□ -2.36
PLOD3O60568 RNU6-388P-201ENST00000517012 105 ntBASIC0.31□□□□□ -2.36
PLOD3O60568 RNU6-389P-201ENST00000517048 105 ntBASIC0.31□□□□□ -2.36
PLOD3O60568 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.31□□□□□ -2.36
PLOD3O60568 Y_RNA.32-201ENST00000362589 110 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 RNU6-379P-201ENST00000363813 104 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 Y_RNA.497-201ENST00000384447 98 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 RNU6-535P-201ENST00000384722 107 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 AC096949.1-201ENST00000412047 152 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 RNU5E-3P-201ENST00000515913 68 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 RNA5SP236-201ENST00000516169 116 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 RNU6-1194P-201ENST00000516208 104 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 SNORA31.14-201ENST00000516728 116 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 AP003327.1-201ENST00000529684 127 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 MIR4305-201ENST00000583252 102 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 AC072026.1-201ENST00000605023 201 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 MIR3658-201ENST00000636291 56 ntBASIC0.3□□□□□ -2.36
PLOD3O60568 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 RNA5SP133-201ENST00000363368 119 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 Y_RNA.401-201ENST00000383965 117 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 SNORA8.2-201ENST00000384372 139 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 RNU6-239P-201ENST00000390990 99 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.29□□□□□ -2.36
PLOD3O60568 RNU6-531P-201ENST00000516694 104 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 RNU7-35P-201ENST00000517174 62 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.29□□□□□ -2.36
PLOD3O60568 AC138907.4-201ENST00000570107 226 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 AC021443.1-201ENST00000604478 211 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 AC141273.2-201ENST00000618989 130 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 U6.109-201ENST00000636749 87 ntBASIC0.29□□□□□ -2.36
PLOD3O60568 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.29□□□□□ -2.36
PLOD3O60568 Y_RNA.120-201ENST00000363304 110 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 Y_RNA.258-201ENST00000364613 105 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 Y_RNA.531-201ENST00000384589 121 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 Y_RNA.536-201ENST00000384621 113 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 Y_RNA.552-201ENST00000384665 112 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 RNU7-164P-201ENST00000459221 62 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 RNU2-35P-201ENST00000516446 142 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 RNU6-861P-201ENST00000516745 106 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 RNU6-765P-201ENST00000516916 99 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 MIR548AE2-201ENST00000583456 67 ntBASIC0.28□□□□□ -2.36
PLOD3O60568 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.28□□□□□ -2.36
PLOD3O60568 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
PLOD3O60568 MIR330-201ENST00000362196 94 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 RNU6-1099P-201ENST00000363533 107 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 Y_RNA.174-201ENST00000363781 105 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 RNU4-84P-201ENST00000364200 139 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 RNU6-1229P-201ENST00000364295 107 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 Y_RNA.476-201ENST00000384347 108 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 RNU6-291P-201ENST00000384720 107 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 Y_RNA.584-201ENST00000391090 114 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 RNU6-863P-201ENST00000515989 104 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 SNORD67.1-201ENST00000516618 108 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 RNA5SP330-201ENST00000517096 96 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 MIR3646-201ENST00000578301 84 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 AC105081.1-201ENST00000617727 106 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 MIR924-201ENST00000638017 53 ntBASIC0.27□□□□□ -2.37
PLOD3O60568 MIR101-2-201ENST00000362195 79 ntBASIC0.26□□□□□ -2.37
PLOD3O60568 SNORD44.1-201ENST00000363202 61 ntBASIC0.26□□□□□ -2.37
PLOD3O60568 RNU6-508P-201ENST00000363231 103 ntBASIC0.26□□□□□ -2.37
PLOD3O60568 Y_RNA.662-201ENST00000516028 97 ntBASIC0.26□□□□□ -2.37
PLOD3O60568 RNA5SP268-201ENST00000516828 124 ntBASIC0.26□□□□□ -2.37
PLOD3O60568 DNAJC19P2-201ENST00000593340 302 ntBASIC0.26□□□□□ -2.37
PLOD3O60568 AC011603.4-201ENST00000611325 277 ntBASIC0.26□□□□□ -2.37
PLOD3O60568 RNU4-58P-201ENST00000363192 141 ntBASIC0.25□□□□□ -2.37
PLOD3O60568 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
PLOD3O60568 SNORD118-201ENST00000363593 134 ntBASIC0.25□□□□□ -2.37
PLOD3O60568 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.25□□□□□ -2.37
PLOD3O60568 SUMO1P3-201ENST00000439961 304 ntBASIC0.25□□□□□ -2.37
PLOD3O60568 RNU6-138P-201ENST00000515952 107 ntBASIC0.25□□□□□ -2.37
PLOD3O60568 MIR8087-201ENST00000612745 78 ntBASIC0.25□□□□□ -2.37
PLOD3O60568 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.25□□□□□ -2.37
PLOD3O60568 SNORD115-2-201ENST00000362842 82 ntBASIC0.24□□□□□ -2.37
PLOD3O60568 RNA5SP62-201ENST00000363457 110 ntBASIC0.24□□□□□ -2.37
PLOD3O60568 RNY1P11-201ENST00000363759 113 ntBASIC0.24□□□□□ -2.37
PLOD3O60568 RNU6-309P-201ENST00000364573 106 ntBASIC0.24□□□□□ -2.37
PLOD3O60568 SNORD115-20-201ENST00000365099 82 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 205.7 ms