Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU6-203P-201ENST00000384038 104 ntBASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 SNORD88.1-201ENST00000408684 91 ntBASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 DEFB122-202ENST00000569013 197 ntBASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 AP000942.3-201ENST00000603702 160 ntBASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 AC005520.4-201ENST00000604337 90 ntBASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 U4.3-201ENST00000621047 82 ntBASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 MIR6733-201ENST00000635723 61 ntBASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PCDHB3Q9Y5E6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 RNU6-154P-201ENST00000384306 106 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 MIR1302-7-201ENST00000408841 72 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 RNU6-1165P-201ENST00000410119 107 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 RNA5SP100-201ENST00000410903 110 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 RNA5SP59-201ENST00000410922 110 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 SNORD63B-201ENST00000411005 70 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 AL139132.1-201ENST00000431587 344 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 AC093423.1-201ENST00000440817 142 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 RNA5SP356-201ENST00000515972 94 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 AL033523.1-201ENST00000605153 153 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 AC007318.2-201ENST00000620999 243 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
PCDHB3Q9Y5E6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
PCDHB3Q9Y5E6 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 VTRNA1-1-201ENST00000363120 99 ntBASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-1051P-201ENST00000365471 102 ntBASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-360P-201ENST00000390944 104 ntBASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-531P-201ENST00000516694 104 ntBASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 SNORA31.17-201ENST00000516953 127 ntBASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
PCDHB3Q9Y5E6 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 Y_RNA.42-201ENST00000362660 108 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-301P-201ENST00000384277 107 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-291P-201ENST00000384720 107 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 MIR9-2-201ENST00000384838 87 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-1194P-201ENST00000516208 104 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 MIR3162-201ENST00000581818 82 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 MIR4672-201ENST00000583126 81 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 MIR4264-201ENST00000583520 66 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 MIR3192-201ENST00000584920 77 ntBASIC2.81□□□□□ -1.96
PCDHB3Q9Y5E6 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 RNU4-82P-201ENST00000362443 140 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 RNU1-51P-201ENST00000365345 176 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 SNORA9.2-201ENST00000365361 133 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-396P-201ENST00000365369 105 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 MIR194-1-201ENST00000384892 85 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 RNA5SP184-201ENST00000411071 108 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 AC003982.1-202ENST00000469928 248 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 U1.36-201ENST00000620684 176 ntBASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
PCDHB3Q9Y5E6 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-340P-201ENST00000364005 107 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 Y_RNA.207-201ENST00000364142 106 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 Y_RNA.371-201ENST00000365591 113 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 MT-TF-201ENST00000387314 71 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 AC004965.1-201ENST00000413033 213 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 RNU7-62P-201ENST00000458856 62 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 RN7SL429P-201ENST00000479090 223 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 RN7SL489P-201ENST00000486185 223 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 RN7SL327P-201ENST00000488659 223 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 SNORA25.16-201ENST00000516741 121 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 uc_338.6-201ENST00000613544 171 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 RN7SL853P-201ENST00000617250 223 ntBASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDHB3Q9Y5E6 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 MIR449A-201ENST00000362113 91 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 RNU4-58P-201ENST00000363192 141 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 SNORD41-201ENST00000386967 70 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-205P-201ENST00000390858 107 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 AC087499.2-201ENST00000432861 149 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 MIR4491-201ENST00000581087 68 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 MIR4435-1-201ENST00000582552 80 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
PCDHB3Q9Y5E6 RNU6-53P-201ENST00000365367 106 ntBASIC2.77□□□□□ -1.97
PCDHB3Q9Y5E6 RNU6-630P-201ENST00000391258 106 ntBASIC2.77□□□□□ -1.97
PCDHB3Q9Y5E6 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
PCDHB3Q9Y5E6 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.77□□□□□ -1.97
PCDHB3Q9Y5E6 ZNF209P-201ENST00000593450 2304 ntBASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 U8.13-201ENST00000390842 128 ntBASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 AC244636.1-201ENST00000421152 228 ntBASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 SNORA9.3-201ENST00000516383 129 ntBASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 RNU11-2P-201ENST00000516898 142 ntBASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 MIR4319-201ENST00000577285 85 ntBASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
PCDHB3Q9Y5E6 SNORA25.3-201ENST00000363205 127 ntBASIC2.75□□□□□ -1.97
PCDHB3Q9Y5E6 RNU6-499P-201ENST00000365615 107 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 286.2 ms