Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 MIR548AE2-201ENST00000583456 67 ntBASIC0.99□□□□□ -2.25
Q9N2J8 MIR100-201ENST00000385259 80 ntBASIC0.98□□□□□ -2.25
Q9N2J8 MIR1827-201ENST00000408549 66 ntBASIC0.98□□□□□ -2.25
Q9N2J8 RNU4-69P-201ENST00000410677 143 ntBASIC0.98□□□□□ -2.25
Q9N2J8 AL603825.1-201ENST00000438481 80 ntBASIC0.98□□□□□ -2.25
Q9N2J8 U7.7-201ENST00000459276 60 ntBASIC0.98□□□□□ -2.25
Q9N2J8 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.98□□□□□ -2.25
Q9N2J8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.98□□□□□ -2.25
Q9N2J8 RNU7-35P-201ENST00000517174 62 ntBASIC0.98□□□□□ -2.25
Q9N2J8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.97□□□□□ -2.25
Q9N2J8 Y_RNA.338-201ENST00000365320 114 ntBASIC0.97□□□□□ -2.25
Q9N2J8 SNORA32-201ENST00000384072 121 ntBASIC0.97□□□□□ -2.25
Q9N2J8 MIR1263-201ENST00000408324 86 ntBASIC0.97□□□□□ -2.25
Q9N2J8 MIR1257-201ENST00000408490 117 ntBASIC0.97□□□□□ -2.25
Q9N2J8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.97□□□□□ -2.25
Q9N2J8 PDCD5P2-201ENST00000507570 312 ntBASIC0.97□□□□□ -2.25
Q9N2J8 RNU6-1061P-201ENST00000516530 99 ntBASIC0.97□□□□□ -2.25
Q9N2J8 AC023934.1-201ENST00000574529 2389 ntBASIC0.97□□□□□ -2.25
Q9N2J8 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
Q9N2J8 Y_RNA.213-201ENST00000364178 111 ntBASIC0.96□□□□□ -2.26
Q9N2J8 RNU6-392P-201ENST00000364926 101 ntBASIC0.96□□□□□ -2.26
Q9N2J8 SNORD58C-201ENST00000365223 64 ntBASIC0.96□□□□□ -2.26
Q9N2J8 RNU6-949P-201ENST00000384040 107 ntBASIC0.96□□□□□ -2.26
Q9N2J8 RNU6-80P-201ENST00000384195 107 ntBASIC0.96□□□□□ -2.26
Q9N2J8 MIR759-201ENST00000390224 91 ntBASIC0.96□□□□□ -2.26
Q9N2J8 SNORD89-201ENST00000390981 114 ntBASIC0.96□□□□□ -2.26
Q9N2J8 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
Q9N2J8 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
Q9N2J8 COX6CP6-201ENST00000490840 228 ntBASIC0.96□□□□□ -2.26
Q9N2J8 RNU7-79P-201ENST00000516082 62 ntBASIC0.96□□□□□ -2.26
Q9N2J8 RNU6-781P-201ENST00000516377 101 ntBASIC0.96□□□□□ -2.26
Q9N2J8 AC022523.2-201ENST00000561045 150 ntBASIC0.96□□□□□ -2.26
Q9N2J8 MIR4661-201ENST00000582720 75 ntBASIC0.96□□□□□ -2.26
Q9N2J8 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
Q9N2J8 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
Q9N2J8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
Q9N2J8 Y_RNA.198-201ENST00000364013 98 ntBASIC0.95□□□□□ -2.26
Q9N2J8 RNY1P13-201ENST00000365030 105 ntBASIC0.95□□□□□ -2.26
Q9N2J8 SNORD77B-201ENST00000391112 67 ntBASIC0.95□□□□□ -2.26
Q9N2J8 UBL5P1-201ENST00000507979 193 ntBASIC0.95□□□□□ -2.26
Q9N2J8 TRMT112P2-201ENST00000512910 132 ntBASIC0.95□□□□□ -2.26
Q9N2J8 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.95□□□□□ -2.26
Q9N2J8 RNU6-772P-201ENST00000516042 105 ntBASIC0.95□□□□□ -2.26
Q9N2J8 RNA5SP255-201ENST00000516370 107 ntBASIC0.95□□□□□ -2.26
Q9N2J8 RNU6-977P-201ENST00000516411 103 ntBASIC0.95□□□□□ -2.26
Q9N2J8 MIR4676-201ENST00000583078 72 ntBASIC0.95□□□□□ -2.26
Q9N2J8 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.95□□□□□ -2.26
Q9N2J8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
Q9N2J8 RNU6-53P-201ENST00000365367 106 ntBASIC0.94□□□□□ -2.26
Q9N2J8 Y_RNA.528-201ENST00000384575 108 ntBASIC0.94□□□□□ -2.26
Q9N2J8 RNU6-1104P-201ENST00000384723 104 ntBASIC0.94□□□□□ -2.26
Q9N2J8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.94□□□□□ -2.26
Q9N2J8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.94□□□□□ -2.26
Q9N2J8 MIR3163-201ENST00000581592 73 ntBASIC0.94□□□□□ -2.26
Q9N2J8 AC025627.3-201ENST00000582078 182 ntBASIC0.94□□□□□ -2.26
Q9N2J8 AC020891.4-201ENST00000605745 93 ntBASIC0.94□□□□□ -2.26
Q9N2J8 AC025166.1-201ENST00000612411 163 ntBASIC0.94□□□□□ -2.26
Q9N2J8 RNU6-369P-201ENST00000362515 102 ntBASIC0.93□□□□□ -2.26
Q9N2J8 Y_RNA.218-201ENST00000364218 104 ntBASIC0.93□□□□□ -2.26
Q9N2J8 Y_RNA.346-201ENST00000365385 112 ntBASIC0.93□□□□□ -2.26
Q9N2J8 RNU6-81P-201ENST00000365608 104 ntBASIC0.93□□□□□ -2.26
Q9N2J8 SNORA22-201ENST00000383907 134 ntBASIC0.93□□□□□ -2.26
Q9N2J8 SNORA22C-201ENST00000384614 134 ntBASIC0.93□□□□□ -2.26
Q9N2J8 MIR125B2-201ENST00000385128 89 ntBASIC0.93□□□□□ -2.26
Q9N2J8 MIRLET7F2-201ENST00000385277 83 ntBASIC0.93□□□□□ -2.26
Q9N2J8 SNORD93-201ENST00000408813 74 ntBASIC0.93□□□□□ -2.26
Q9N2J8 RNU6-321P-201ENST00000410912 106 ntBASIC0.93□□□□□ -2.26
Q9N2J8 AC015818.7-201ENST00000428754 109 ntBASIC0.93□□□□□ -2.26
Q9N2J8 AC087499.7-201ENST00000441958 109 ntBASIC0.93□□□□□ -2.26
Q9N2J8 RNU6-1053P-201ENST00000515930 101 ntBASIC0.93□□□□□ -2.26
Q9N2J8 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.93□□□□□ -2.26
Q9N2J8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
Q9N2J8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
Q9N2J8 AL157777.2-201ENST00000258070 137 ntBASIC0.92□□□□□ -2.26
Q9N2J8 RNU4-38P-201ENST00000364472 129 ntBASIC0.92□□□□□ -2.26
Q9N2J8 RNU1-36P-201ENST00000365130 165 ntBASIC0.92□□□□□ -2.26
Q9N2J8 U8.15-201ENST00000390947 134 ntBASIC0.92□□□□□ -2.26
Q9N2J8 MIR938-201ENST00000401216 83 ntBASIC0.92□□□□□ -2.26
Q9N2J8 RNU6-1234P-201ENST00000516877 103 ntBASIC0.92□□□□□ -2.26
Q9N2J8 MIR3910-1-201ENST00000580936 111 ntBASIC0.92□□□□□ -2.26
Q9N2J8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.92□□□□□ -2.26
Q9N2J8 Y_RNA.71-201ENST00000362892 104 ntBASIC0.91□□□□□ -2.26
Q9N2J8 RNY1P10-201ENST00000363268 113 ntBASIC0.91□□□□□ -2.26
Q9N2J8 RNU6-959P-201ENST00000384671 107 ntBASIC0.91□□□□□ -2.26
Q9N2J8 MIR520F-201ENST00000384824 87 ntBASIC0.91□□□□□ -2.26
Q9N2J8 RNU7-107P-201ENST00000459121 61 ntBASIC0.91□□□□□ -2.26
Q9N2J8 MIR4804-201ENST00000581683 73 ntBASIC0.91□□□□□ -2.26
Q9N2J8 FAM71BP1-201ENST00000604431 523 ntBASIC0.91□□□□□ -2.26
Q9N2J8 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.91□□□□□ -2.26
Q9N2J8 MTND5P18-201ENST00000445624 1801 ntBASIC0.9□□□□□ -2.27
Q9N2J8 MIR337-201ENST00000362281 93 ntBASIC0.9□□□□□ -2.27
Q9N2J8 SNORD114-10-201ENST00000363409 72 ntBASIC0.9□□□□□ -2.27
Q9N2J8 SNORD116-14-201ENST00000383894 92 ntBASIC0.9□□□□□ -2.27
Q9N2J8 SNORD116-17-201ENST00000383929 92 ntBASIC0.9□□□□□ -2.27
Q9N2J8 RNU6-364P-201ENST00000384387 107 ntBASIC0.9□□□□□ -2.27
Q9N2J8 SNORD116-15-201ENST00000384445 92 ntBASIC0.9□□□□□ -2.27
Q9N2J8 SNORD116-19-201ENST00000384729 92 ntBASIC0.9□□□□□ -2.27
Q9N2J8 SNORD105-201ENST00000386910 85 ntBASIC0.9□□□□□ -2.27
Q9N2J8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
Q9N2J8 SNORD67.1-201ENST00000516618 108 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 343.1 ms