Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 Y_RNA.430-201ENST00000384081 110 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 SNORA20-201ENST00000384662 132 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.574-201ENST00000384766 95 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 RNA5SP299-201ENST00000391203 116 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 SNORA79-201ENST00000408376 140 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 MIR1295A-201ENST00000408463 79 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 AL512326.2-201ENST00000426359 151 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.720-201ENST00000517166 92 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 MIR7107-201ENST00000611489 80 ntBASIC0.13□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.262-201ENST00000364641 102 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNY1P13-201ENST00000365030 105 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNU6-187P-201ENST00000384139 106 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.454-201ENST00000384224 113 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNU6-291P-201ENST00000384720 107 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNA5SP261-201ENST00000410536 106 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNU6-469P-201ENST00000516253 101 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNU6-1149P-201ENST00000516810 97 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNA5SP268-201ENST00000516828 124 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 SCARNA15-202ENST00000516881 127 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNU7-70P-201ENST00000516941 66 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 MIR3152-201ENST00000579801 74 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 MIR5190-201ENST00000581537 80 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 MIR6755-201ENST00000619993 66 ntBASIC0.12□□□□□ -2.39
TM9SF3Q9HD45 RNU6-923P-201ENST00000364753 107 ntBASIC0.11□□□□□ -2.39
TM9SF3Q9HD45 RNU6-1292P-201ENST00000383856 107 ntBASIC0.11□□□□□ -2.39
TM9SF3Q9HD45 RNU6-949P-201ENST00000384040 107 ntBASIC0.11□□□□□ -2.39
TM9SF3Q9HD45 RNU4-43P-201ENST00000410628 137 ntBASIC0.11□□□□□ -2.39
TM9SF3Q9HD45 MIR4744-201ENST00000581563 82 ntBASIC0.11□□□□□ -2.39
TM9SF3Q9HD45 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.178-201ENST00000363832 102 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.433-201ENST00000384089 102 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 Y_RNA.539-201ENST00000384635 107 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 RNU6-535P-201ENST00000384722 107 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 RNU6-578P-201ENST00000390980 103 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 MIR548F4-201ENST00000408515 105 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 SNORD116-25-201ENST00000516517 92 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 AC069113.3-201ENST00000521019 150 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 MIR378D2-201ENST00000580636 98 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.1□□□□□ -2.39
TM9SF3Q9HD45 RNA5SP245-201ENST00000364239 121 ntBASIC0.09□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.352-201ENST00000365439 102 ntBASIC0.09□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.423-201ENST00000384057 113 ntBASIC0.09□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.470-201ENST00000384307 117 ntBASIC0.09□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.477-201ENST00000384352 108 ntBASIC0.09□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.697-201ENST00000516776 113 ntBASIC0.09□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.757-201ENST00000578934 114 ntBASIC0.09□□□□□ -2.4
TM9SF3Q9HD45 SNORA63.5-201ENST00000363548 123 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 SNORD27-201ENST00000363981 72 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.326-201ENST00000365176 113 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 RNU6-1160P-201ENST00000384546 104 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.536-201ENST00000384621 113 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 MIR606-201ENST00000384851 96 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 PCNPP3-201ENST00000393579 471 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 MTND2P23-201ENST00000422990 651 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 RNU6-531P-201ENST00000516694 104 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 MIR4752-201ENST00000579672 72 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 MIR4308-201ENST00000580634 81 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 AC008737.2-201ENST00000599446 118 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 MIR4315-1-201ENST00000636800 73 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 MIR4315-2-201ENST00000640925 73 ntBASIC0.08□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.47-201ENST00000362697 108 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.65-201ENST00000362846 100 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 RNU6-103P-201ENST00000363686 107 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.182-201ENST00000363880 111 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 SNORA32-201ENST00000384072 121 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 RNU2-59P-201ENST00000410482 191 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 RNU6-1086P-201ENST00000410930 100 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.797-201ENST00000515977 94 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 RNU7-79P-201ENST00000516082 62 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 RNU7-129P-201ENST00000516128 62 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 RNA5SP227-201ENST00000516184 113 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 RNA5SP285-201ENST00000516619 119 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 AC112693.2-201ENST00000556538 232 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.518-201ENST00000384552 113 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.571-201ENST00000384753 98 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 MIR624-201ENST00000385217 97 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 RNU6-1194P-201ENST00000516208 104 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 RNU6-765P-201ENST00000516916 99 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 RNA5SP47-201ENST00000517230 109 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 DEFB131E-201ENST00000532329 154 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 AC006504.6-201ENST00000590142 199 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 AC244669.1-204ENST00000621564 178 ntBASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.06□□□□□ -2.4
TM9SF3Q9HD45 RNA5SP133-201ENST00000363368 119 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 RNY4P28-201ENST00000365281 93 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 RNU6-643P-201ENST00000384018 107 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 SNORD28-201ENST00000384706 75 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 RNA5SP144-201ENST00000410846 116 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 SNORD127-201ENST00000458892 86 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 SCARNA16.5-201ENST00000517114 183 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 MRPS18CP4-201ENST00000535821 231 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 AL117187.1-201ENST00000555482 181 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 U6.109-201ENST00000636749 87 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 U6.104-201ENST00000637979 90 ntBASIC0.05□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.174-201ENST00000363781 105 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 RNU6-1229P-201ENST00000364295 107 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 RNY1P6-201ENST00000384193 109 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 334.8 ms