Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
TRIM41Q8WV44 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.87□□□□□ -1.79
TRIM41Q8WV44 Y_RNA.98-201ENST00000363109 102 ntBASIC3.87□□□□□ -1.79
TRIM41Q8WV44 MIR518A2-201ENST00000384966 87 ntBASIC3.87□□□□□ -1.79
TRIM41Q8WV44 RNA5SP465-201ENST00000391195 109 ntBASIC3.87□□□□□ -1.79
TRIM41Q8WV44 AC093729.1-201ENST00000513074 128 ntBASIC3.87□□□□□ -1.79
TRIM41Q8WV44 RNA5SP481-201ENST00000516814 122 ntBASIC3.87□□□□□ -1.79
TRIM41Q8WV44 RNA5SP137-201ENST00000516833 135 ntBASIC3.87□□□□□ -1.79
TRIM41Q8WV44 Z97988.1-201ENST00000637697 135 ntBASIC3.87□□□□□ -1.79
TRIM41Q8WV44 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM41Q8WV44 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
TRIM41Q8WV44 RNU6-112P-201ENST00000363599 104 ntBASIC3.86□□□□□ -1.79
TRIM41Q8WV44 Y_RNA.168-201ENST00000363740 102 ntBASIC3.86□□□□□ -1.79
TRIM41Q8WV44 MIR583-201ENST00000384846 75 ntBASIC3.86□□□□□ -1.79
TRIM41Q8WV44 SNORA48.1-201ENST00000390879 135 ntBASIC3.86□□□□□ -1.79
TRIM41Q8WV44 AC027119.1-201ENST00000440877 241 ntBASIC3.86□□□□□ -1.79
TRIM41Q8WV44 UBBP3-201ENST00000445497 241 ntBASIC3.86□□□□□ -1.79
TRIM41Q8WV44 MIR4712-201ENST00000583750 82 ntBASIC3.86□□□□□ -1.79
TRIM41Q8WV44 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM41Q8WV44 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU1-51P-201ENST00000365345 176 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-447P-201ENST00000410293 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-1118P-201ENST00000410382 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-1076P-201ENST00000410397 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-613P-201ENST00000410412 108 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-355P-201ENST00000410427 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-791P-201ENST00000410467 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-705P-201ENST00000410601 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-1100P-201ENST00000410691 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-860P-201ENST00000410860 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNA5SP501-201ENST00000410990 112 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-1217P-201ENST00000411276 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNU6-785P-201ENST00000411324 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC3.85□□□□□ -1.79
TRIM41Q8WV44 RNA5SP476-201ENST00000516613 103 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 MIR4764-201ENST00000580680 88 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 AC020891.4-201ENST00000605745 93 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 U6.90-201ENST00000614007 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 U6.70-201ENST00000620287 104 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 MIR219B-201ENST00000637023 88 ntBASIC3.85□□□□□ -1.79
TRIM41Q8WV44 MIR424-201ENST00000362227 98 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 Y_RNA.68-201ENST00000362881 102 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 RNU6-480P-201ENST00000384332 107 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 MIR520C-201ENST00000385005 87 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 RNA5SP237-201ENST00000410414 113 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 RNU7-43P-201ENST00000516554 64 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 SUB1P4-201ENST00000566062 339 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 MIR6766-201ENST00000622641 72 ntBASIC3.84□□□□□ -1.79
TRIM41Q8WV44 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRIM41Q8WV44 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRIM41Q8WV44 RNU6-519P-201ENST00000410590 108 ntBASIC3.83□□□□□ -1.8
TRIM41Q8WV44 AP001362.1-201ENST00000625165 124 ntBASIC3.83□□□□□ -1.8
TRIM41Q8WV44 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
TRIM41Q8WV44 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM41Q8WV44 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TRIM41Q8WV44 Y_RNA.173-201ENST00000363776 113 ntBASIC3.82□□□□□ -1.8
TRIM41Q8WV44 DEFA7P-201ENST00000382676 285 ntBASIC3.82□□□□□ -1.8
TRIM41Q8WV44 RNU6-296P-201ENST00000384608 107 ntBASIC3.82□□□□□ -1.8
TRIM41Q8WV44 HAR1A.1-201ENST00000459583 118 ntBASIC3.82□□□□□ -1.8
TRIM41Q8WV44 Y_RNA.433-201ENST00000384089 102 ntBASIC3.81□□□□□ -1.8
TRIM41Q8WV44 MIR221-201ENST00000385135 110 ntBASIC3.81□□□□□ -1.8
TRIM41Q8WV44 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
TRIM41Q8WV44 SNORD13-201ENST00000459299 104 ntBASIC3.81□□□□□ -1.8
TRIM41Q8WV44 AC139453.2-201ENST00000487255 133 ntBASIC3.81□□□□□ -1.8
TRIM41Q8WV44 MIR548AO-201ENST00000579992 96 ntBASIC3.81□□□□□ -1.8
TRIM41Q8WV44 MIR6073-201ENST00000352083 89 ntBASIC3.8□□□□□ -1.8
TRIM41Q8WV44 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM41Q8WV44 AC133485.1-201ENST00000567176 124 ntBASIC3.8□□□□□ -1.8
TRIM41Q8WV44 SNORD14A-201ENST00000606526 91 ntBASIC3.8□□□□□ -1.8
TRIM41Q8WV44 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC3.8□□□□□ -1.8
TRIM41Q8WV44 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM41Q8WV44 SNORA2B-201ENST00000384583 137 ntBASIC3.79□□□□□ -1.8
TRIM41Q8WV44 SNORD38B-201ENST00000384690 67 ntBASIC3.79□□□□□ -1.8
TRIM41Q8WV44 Y_RNA.565-201ENST00000384719 101 ntBASIC3.79□□□□□ -1.8
TRIM41Q8WV44 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC3.79□□□□□ -1.8
TRIM41Q8WV44 SNORD38B-202ENST00000625943 69 ntBASIC3.79□□□□□ -1.8
TRIM41Q8WV44 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM41Q8WV44 RNY1P13-201ENST00000365030 105 ntBASIC3.78□□□□□ -1.8
TRIM41Q8WV44 MIR4285-201ENST00000581001 85 ntBASIC3.78□□□□□ -1.8
TRIM41Q8WV44 RNU4-32P-201ENST00000363404 141 ntBASIC3.77□□□□□ -1.81
TRIM41Q8WV44 SNORA40.18-201ENST00000391200 128 ntBASIC3.77□□□□□ -1.81
TRIM41Q8WV44 AC019129.1-201ENST00000403786 261 ntBASIC3.77□□□□□ -1.81
TRIM41Q8WV44 RNU6-917P-201ENST00000516294 104 ntBASIC3.77□□□□□ -1.81
TRIM41Q8WV44 MIR4251-201ENST00000635819 61 ntBASIC3.77□□□□□ -1.81
TRIM41Q8WV44 HMGN2P39-201ENST00000398005 273 ntBASIC3.76□□□□□ -1.81
TRIM41Q8WV44 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.76□□□□□ -1.81
TRIM41Q8WV44 RNU7-153P-201ENST00000516455 62 ntBASIC3.76□□□□□ -1.81
TRIM41Q8WV44 MIR4658-201ENST00000584344 65 ntBASIC3.76□□□□□ -1.81
TRIM41Q8WV44 AL137847.3-201ENST00000611521 109 ntBASIC3.76□□□□□ -1.81
TRIM41Q8WV44 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.74□□□□□ -1.81
TRIM41Q8WV44 RNA5SP190-201ENST00000365222 118 ntBASIC3.74□□□□□ -1.81
TRIM41Q8WV44 RNU1-138P-201ENST00000384093 164 ntBASIC3.74□□□□□ -1.81
TRIM41Q8WV44 RPS29P11-201ENST00000496507 171 ntBASIC3.74□□□□□ -1.81
TRIM41Q8WV44 RNU6-56P-201ENST00000516986 93 ntBASIC3.74□□□□□ -1.81
TRIM41Q8WV44 AC140658.3-201ENST00000567603 271 ntBASIC3.74□□□□□ -1.81
TRIM41Q8WV44 AC141846.1-201ENST00000568348 142 ntBASIC3.74□□□□□ -1.81
TRIM41Q8WV44 MIR6895-201ENST00000613497 78 ntBASIC3.74□□□□□ -1.81
TRIM41Q8WV44 SNORD56.5-201ENST00000364281 72 ntBASIC3.73□□□□□ -1.81
TRIM41Q8WV44 Y_RNA.327-201ENST00000365201 102 ntBASIC3.73□□□□□ -1.81
TRIM41Q8WV44 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 812.3 ms