Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MIR3646-201ENST00000578301 84 ntBASIC0.61□□□□□ -2.31
LDB1Q86U70 MIR6844-201ENST00000637122 62 ntBASIC0.61□□□□□ -2.31
LDB1Q86U70 RNU6-239P-201ENST00000390990 99 ntBASIC0.6□□□□□ -2.31
LDB1Q86U70 RNU5E-9P-201ENST00000411164 104 ntBASIC0.6□□□□□ -2.31
LDB1Q86U70 RNU6-861P-201ENST00000516745 106 ntBASIC0.6□□□□□ -2.31
LDB1Q86U70 MIR3612-201ENST00000579753 87 ntBASIC0.6□□□□□ -2.31
LDB1Q86U70 AC090897.1-201ENST00000580909 226 ntBASIC0.6□□□□□ -2.31
LDB1Q86U70 AC022709.1-201ENST00000615967 87 ntBASIC0.6□□□□□ -2.31
LDB1Q86U70 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
LDB1Q86U70 RNA5SP236-201ENST00000516169 116 ntBASIC0.59□□□□□ -2.31
LDB1Q86U70 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
LDB1Q86U70 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.59□□□□□ -2.31
LDB1Q86U70 AC141846.1-201ENST00000568348 142 ntBASIC0.59□□□□□ -2.31
LDB1Q86U70 Y_RNA.757-201ENST00000578934 114 ntBASIC0.59□□□□□ -2.31
LDB1Q86U70 AC008608.1-201ENST00000603910 127 ntBASIC0.59□□□□□ -2.31
LDB1Q86U70 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
LDB1Q86U70 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
LDB1Q86U70 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
LDB1Q86U70 MIR18A-201ENST00000362310 71 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 RNU6-349P-201ENST00000362402 107 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 RNU4-84P-201ENST00000364200 139 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 Y_RNA.240-201ENST00000364469 95 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 Y_RNA.257-201ENST00000364596 102 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 SNORA18-201ENST00000384416 132 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 SNORD37.2-201ENST00000391075 66 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 SNORD100-201ENST00000408573 76 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 RNU6-588P-201ENST00000410281 105 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 MTATP6P21-201ENST00000440681 189 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 Y_RNA.700-201ENST00000516806 100 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 MIR3658-201ENST00000636291 56 ntBASIC0.58□□□□□ -2.32
LDB1Q86U70 Y_RNA.29-201ENST00000362570 113 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 RNU6-1318P-201ENST00000365389 103 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 MIR140-201ENST00000385282 100 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 RNA5SP144-201ENST00000410846 116 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 RNU4-83P-201ENST00000410863 133 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 AL022718.1-201ENST00000412004 84 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 RNU7-120P-201ENST00000459334 63 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 RNU7-121P-201ENST00000516604 62 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 AC011603.4-201ENST00000611325 277 ntBASIC0.57□□□□□ -2.32
LDB1Q86U70 RNA5SP499-201ENST00000363982 119 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 RNU6-949P-201ENST00000384040 107 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 Y_RNA.497-201ENST00000384447 98 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 RNU6-1086P-201ENST00000410930 100 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 AC002350.1-201ENST00000490759 375 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 Y_RNA.662-201ENST00000516028 97 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 RNU6-1258P-201ENST00000516911 111 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 SNORA81.3-201ENST00000517283 198 ntBASIC0.56□□□□□ -2.32
LDB1Q86U70 Y_RNA.171-201ENST00000363760 102 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 RNU6-682P-201ENST00000363843 106 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 RNU6-342P-201ENST00000384521 104 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 U8.15-201ENST00000390947 134 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 RNU7-113P-201ENST00000459273 62 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 RNU6-448P-201ENST00000517052 107 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 DNAJC19P2-201ENST00000593340 302 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 AC004792.1-201ENST00000614523 137 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.55□□□□□ -2.32
LDB1Q86U70 RNU6-690P-201ENST00000365242 106 ntBASIC0.54□□□□□ -2.32
LDB1Q86U70 RNY1P8-201ENST00000383970 114 ntBASIC0.54□□□□□ -2.32
LDB1Q86U70 MIR489-201ENST00000384923 84 ntBASIC0.54□□□□□ -2.32
LDB1Q86U70 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
LDB1Q86U70 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
LDB1Q86U70 AC074198.2-201ENST00000508153 258 ntBASIC0.54□□□□□ -2.32
LDB1Q86U70 Y_RNA.42-201ENST00000362660 108 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 RNU6-403P-201ENST00000363163 104 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 RNY1P11-201ENST00000363759 113 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 RNY1P13-201ENST00000365030 105 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 RNA5SP117-201ENST00000365294 118 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 SNORD18B-201ENST00000365659 72 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 RNA5SP436-201ENST00000516020 115 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 AC090425.1-201ENST00000610007 140 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 MIR8066-201ENST00000617280 78 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
LDB1Q86U70 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 SNORD115-2-201ENST00000362842 82 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 SNORD115-20-201ENST00000365099 82 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 Y_RNA.441-201ENST00000384123 112 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 Y_RNA.785-201ENST00000384290 109 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 RNU6-1135P-201ENST00000411083 103 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 RNU5E-3P-201ENST00000515913 68 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 RNU7-79P-201ENST00000516082 62 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 AP003327.1-201ENST00000529684 127 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 MIR4491-201ENST00000581087 68 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 MIR7111-201ENST00000619751 72 ntBASIC0.52□□□□□ -2.33
LDB1Q86U70 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LDB1Q86U70 AL589743.1-201ENST00000551932 2712 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 RNU6-508P-201ENST00000363231 103 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 Y_RNA.470-201ENST00000384307 117 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 Y_RNA.584-201ENST00000391090 114 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 Y_RNA.588-201ENST00000391254 102 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 RNU6-240P-201ENST00000516098 97 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 RN7SKP12-201ENST00000516275 143 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 RNA5SP33-201ENST00000516687 98 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 RNU7-35P-201ENST00000517174 62 ntBASIC0.51□□□□□ -2.33
LDB1Q86U70 RNU2-60P-201ENST00000517290 128 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 203.3 ms