Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AP1B1P2-201ENST00000416196 106 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 RNU7-107P-201ENST00000459121 61 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 AC087343.1-201ENST00000477341 475 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 RNU7-79P-201ENST00000516082 62 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 RNU6-1234P-201ENST00000516877 103 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
SHFQ7M4L6 AC023934.1-201ENST00000574529 2389 ntBASIC0.91□□□□□ -2.26
SHFQ7M4L6 AL391516.1-201ENST00000554380 2449 ntBASIC0.9□□□□□ -2.26
SHFQ7M4L6 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.9□□□□□ -2.26
SHFQ7M4L6 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
SHFQ7M4L6 MIR1-1-201ENST00000362147 71 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNU6-949P-201ENST00000384040 107 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 Y_RNA.525-201ENST00000384570 113 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 MIR100-201ENST00000385259 80 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 U8.15-201ENST00000390947 134 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNU4-69P-201ENST00000410677 143 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNA5SP136-201ENST00000410906 107 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 BTF3P4-201ENST00000418852 495 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 TMSB4XP3-201ENST00000445144 114 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNU7-185P-201ENST00000459215 60 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 U7.7-201ENST00000459276 60 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 PDCD5P2-201ENST00000507570 312 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNU6-772P-201ENST00000516042 105 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 RNU6-1061P-201ENST00000516530 99 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 MIR4676-201ENST00000583078 72 ntBASIC0.9□□□□□ -2.27
SHFQ7M4L6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
SHFQ7M4L6 MIR378A-201ENST00000362177 66 ntBASIC0.89□□□□□ -2.27
SHFQ7M4L6 Y_RNA.299-201ENST00000364973 94 ntBASIC0.89□□□□□ -2.27
SHFQ7M4L6 RNU6-80P-201ENST00000384195 107 ntBASIC0.89□□□□□ -2.27
SHFQ7M4L6 Y_RNA.528-201ENST00000384575 108 ntBASIC0.89□□□□□ -2.27
SHFQ7M4L6 Y_RNA.630-201ENST00000411370 108 ntBASIC0.89□□□□□ -2.27
SHFQ7M4L6 AC096949.1-201ENST00000412047 152 ntBASIC0.89□□□□□ -2.27
SHFQ7M4L6 Y_RNA.71-201ENST00000362892 104 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 Y_RNA.198-201ENST00000364013 98 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 RNU6-81P-201ENST00000365608 104 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 MIR1257-201ENST00000408490 117 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 COX6CP6-201ENST00000490840 228 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 MIR3910-1-201ENST00000580936 111 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 MIR4804-201ENST00000581683 73 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 AL359881.1-201ENST00000602916 267 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 AC025166.1-201ENST00000612411 163 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 AL589743.1-201ENST00000551932 2712 ntBASIC0.88□□□□□ -2.27
SHFQ7M4L6 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
SHFQ7M4L6 RNU4-38P-201ENST00000364472 129 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 RNU1-36P-201ENST00000365130 165 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 RNU6-959P-201ENST00000384671 107 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 MIR125B2-201ENST00000385128 89 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 RNU6-735P-201ENST00000410612 107 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 RPL39P25-201ENST00000449384 154 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.87□□□□□ -2.27
SHFQ7M4L6 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 RNU6-977P-201ENST00000516411 103 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 SNORD67.1-201ENST00000516618 108 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 RMST_2.1-201ENST00000617263 136 ntBASIC0.87□□□□□ -2.27
SHFQ7M4L6 SNORD93-201ENST00000408813 74 ntBASIC0.86□□□□□ -2.27
SHFQ7M4L6 RNU6-659P-201ENST00000516454 104 ntBASIC0.86□□□□□ -2.27
SHFQ7M4L6 RNU7-137P-201ENST00000516788 62 ntBASIC0.86□□□□□ -2.27
SHFQ7M4L6 MIR4661-201ENST00000582720 75 ntBASIC0.86□□□□□ -2.27
SHFQ7M4L6 AL136317.1-201ENST00000612653 226 ntBASIC0.86□□□□□ -2.27
SHFQ7M4L6 MTND5P18-201ENST00000445624 1801 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 AL157777.2-201ENST00000258070 137 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 Y_RNA.213-201ENST00000364178 111 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
SHFQ7M4L6 MIR520F-201ENST00000384824 87 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 RNU6-482P-201ENST00000391068 107 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 RNU7-56P-201ENST00000458744 62 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
SHFQ7M4L6 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 RNU7-6P-201ENST00000516845 62 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 AC087741.2-201ENST00000619415 172 ntBASIC0.85□□□□□ -2.27
SHFQ7M4L6 SNORD116-14-201ENST00000383894 92 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 SNORD116-17-201ENST00000383929 92 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 SNORD116-15-201ENST00000384445 92 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 SNORD116-19-201ENST00000384729 92 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 SNORD105-201ENST00000386910 85 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 MIR938-201ENST00000401216 83 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 Y_RNA.712-201ENST00000517011 92 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 RNU7-156P-201ENST00000517214 74 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 MIR3163-201ENST00000581592 73 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
SHFQ7M4L6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.84□□□□□ -2.27
SHFQ7M4L6 SNORD114-10-201ENST00000363409 72 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 RNU6-616P-201ENST00000384353 107 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 SNORD77B-201ENST00000391112 67 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 RNU4-83P-201ENST00000410863 133 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 RNU7-102P-201ENST00000458948 62 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 MIR4491-201ENST00000581087 68 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 AC025627.3-201ENST00000582078 182 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 SNORD92-201ENST00000585078 85 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 AC008608.1-201ENST00000603910 127 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 FAM71BP1-201ENST00000604431 523 ntBASIC0.83□□□□□ -2.28
SHFQ7M4L6 MIR8066-201ENST00000617280 78 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 229.6 ms