Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 SNORD38B-202ENST00000625943 69 ntBASIC2.61□□□□□ -1.99
FOXR1Q6PIV2 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
FOXR1Q6PIV2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
FOXR1Q6PIV2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 U8.2-201ENST00000363156 134 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 RNU6-949P-201ENST00000384040 107 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 MIR520H-201ENST00000385126 88 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 MIR9-1-201ENST00000385198 89 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 AL023284.1-201ENST00000403956 276 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 RNA5SP21-201ENST00000410917 96 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 RNU6-75P-201ENST00000515944 104 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 MIR4251-201ENST00000635819 61 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 U6.109-201ENST00000636749 87 ntBASIC2.6□□□□□ -1.99
FOXR1Q6PIV2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 SNORD114-30-201ENST00000364448 72 ntBASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 RNA5SP501-201ENST00000410990 112 ntBASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 HSPE1P24-201ENST00000450782 238 ntBASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 MIR3126-201ENST00000577443 74 ntBASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 SNORD53-201ENST00000579969 78 ntBASIC2.59□□□□□ -1.99
FOXR1Q6PIV2 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
FOXR1Q6PIV2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.58□□□□□ -2
FOXR1Q6PIV2 SNORD36A-201ENST00000362874 73 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 MIR516A2-201ENST00000384888 90 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 MIR516A1-201ENST00000385033 90 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 SNORA48.1-201ENST00000390879 135 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 AC009474.2-201ENST00000451383 136 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 RNU6-871P-201ENST00000516122 100 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 AC121758.2-201ENST00000553271 193 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 MIR3064-201ENST00000581130 66 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 MIR4536-1-201ENST00000583537 88 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.58□□□□□ -2
FOXR1Q6PIV2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
FOXR1Q6PIV2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
FOXR1Q6PIV2 MIR21-201ENST00000362134 72 ntBASIC2.57□□□□□ -2
FOXR1Q6PIV2 RNU6-540P-201ENST00000384622 101 ntBASIC2.57□□□□□ -2
FOXR1Q6PIV2 MIR518A2-201ENST00000384966 87 ntBASIC2.57□□□□□ -2
FOXR1Q6PIV2 RNU6-634P-201ENST00000459134 106 ntBASIC2.57□□□□□ -2
FOXR1Q6PIV2 FGF7P7-201ENST00000514120 227 ntBASIC2.57□□□□□ -2
FOXR1Q6PIV2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.57□□□□□ -2
FOXR1Q6PIV2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
FOXR1Q6PIV2 Y_RNA.119-201ENST00000363301 96 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 SNORA72.6-201ENST00000384520 129 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 MIR627-201ENST00000384979 97 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 RNU6-380P-201ENST00000410207 107 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.56□□□□□ -2
FOXR1Q6PIV2 AC079804.2-201ENST00000490376 200 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 RNA5SP24-201ENST00000516478 95 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 PRELID3BP2-201ENST00000605362 201 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 AP000553.5-201ENST00000641933 54 ntBASIC2.56□□□□□ -2
FOXR1Q6PIV2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
FOXR1Q6PIV2 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.55□□□□□ -2
FOXR1Q6PIV2 MIRLET7F1-201ENST00000362202 87 ntBASIC2.55□□□□□ -2
FOXR1Q6PIV2 WWP1P1-201ENST00000466609 2769 ntBASIC2.55□□□□□ -2
FOXR1Q6PIV2 AC104996.3-201ENST00000590718 94 ntBASIC2.55□□□□□ -2
FOXR1Q6PIV2 MIR7843-201ENST00000622274 79 ntBASIC2.55□□□□□ -2
FOXR1Q6PIV2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
FOXR1Q6PIV2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FOXR1Q6PIV2 RNU6-203P-201ENST00000384038 104 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 RNU6-649P-201ENST00000384463 107 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 MIR588-201ENST00000384900 83 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 SNORD77.2-201ENST00000391045 68 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 RNU7-26P-201ENST00000458980 63 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 snoU13.2-201ENST00000459201 104 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 RNU7-106P-201ENST00000459514 67 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 Y_RNA.660-201ENST00000516002 120 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 MIR3935-201ENST00000583472 104 ntBASIC2.54□□□□□ -2
FOXR1Q6PIV2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
FOXR1Q6PIV2 Y_RNA.205-201ENST00000364128 113 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 Y_RNA.283-201ENST00000364798 112 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 SNORA25.9-201ENST00000365087 128 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 RNU6-571P-201ENST00000384128 107 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 AC092427.1-202ENST00000430569 476 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 Y_RNA.681-201ENST00000516445 113 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 RNA5SP137-201ENST00000516833 135 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 MIR5092-201ENST00000583139 88 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 U4.3-201ENST00000621047 82 ntBASIC2.53□□□□□ -2
FOXR1Q6PIV2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
FOXR1Q6PIV2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
FOXR1Q6PIV2 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 RNU6-330P-201ENST00000363015 107 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 SNORD115-31-201ENST00000365318 82 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 Y_RNA.491-201ENST00000384417 107 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 RNU6-587P-201ENST00000391282 106 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 AC074348.1-201ENST00000426503 132 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 snoU13.17-201ENST00000458802 104 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 snoU13.26-201ENST00000459452 105 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 MIR6740-201ENST00000618268 113 ntBASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.52□□□□□ -2.01
FOXR1Q6PIV2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 RNA5SP289-201ENST00000362332 137 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 RNU6-208P-201ENST00000362431 107 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 SNORD30.1-201ENST00000391309 70 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 Y_RNA.596-201ENST00000410462 109 ntBASIC2.51□□□□□ -2.01
FOXR1Q6PIV2 RNU1-41P-201ENST00000516161 162 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 937.6 ms