Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU6-816P-201ENST00000390914 107 ntBASIC1.74□□□□□ -2.13
HERVK_113P62684 RNU6-1268P-201ENST00000391214 107 ntBASIC1.74□□□□□ -2.13
HERVK_113P62684 RNU6-1239P-201ENST00000391310 107 ntBASIC1.74□□□□□ -2.13
HERVK_113P62684 MIR1302-5-201ENST00000408164 150 ntBASIC1.74□□□□□ -2.13
HERVK_113P62684 RNU6-554P-201ENST00000410466 106 ntBASIC1.74□□□□□ -2.13
HERVK_113P62684 Y_RNA.163-201ENST00000363702 113 ntBASIC1.73□□□□□ -2.13
HERVK_113P62684 MIR489-201ENST00000384923 84 ntBASIC1.73□□□□□ -2.13
HERVK_113P62684 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.73□□□□□ -2.13
HERVK_113P62684 MIR5009-201ENST00000578736 100 ntBASIC1.73□□□□□ -2.13
HERVK_113P62684 Y_RNA.773-201ENST00000607168 90 ntBASIC1.73□□□□□ -2.13
HERVK_113P62684 MIR1255B1-201ENST00000636325 63 ntBASIC1.73□□□□□ -2.13
HERVK_113P62684 AL162726.3-218ENST00000636401 95 ntBASIC1.73□□□□□ -2.13
HERVK_113P62684 AL354695.1-201ENST00000427935 228 ntBASIC1.72□□□□□ -2.13
HERVK_113P62684 PRELID3BP2-201ENST00000605362 201 ntBASIC1.72□□□□□ -2.13
HERVK_113P62684 AL157834.3-201ENST00000615543 103 ntBASIC1.72□□□□□ -2.13
HERVK_113P62684 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
HERVK_113P62684 SNORD115-19-201ENST00000363098 82 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 SNORD115-18-201ENST00000363293 82 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 Y_RNA.155-201ENST00000363632 101 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 SNORD115-17-201ENST00000364612 82 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 Y_RNA.323-201ENST00000365157 109 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 RNU6-616P-201ENST00000384353 107 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 Y_RNA.507-201ENST00000384500 99 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 MIR320A-201ENST00000385302 82 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 AC027119.1-201ENST00000440877 241 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 snoU13.25-201ENST00000458945 104 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 RPL30P7-201ENST00000479312 323 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
HERVK_113P62684 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
HERVK_113P62684 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
HERVK_113P62684 RNU6-396P-201ENST00000365369 105 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 MIR1912-201ENST00000410389 80 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 RNU6-1086P-201ENST00000410930 100 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.7□□□□□ -2.14
HERVK_113P62684 MIR1270-201ENST00000459320 83 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 snoU13.18-201ENST00000459483 104 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 AL133373.1-201ENST00000497098 94 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
HERVK_113P62684 MIR3664-201ENST00000579074 99 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 MIR3613-201ENST00000579844 87 ntBASIC1.7□□□□□ -2.14
HERVK_113P62684 MIR103A2-201ENST00000362154 78 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 RNU6-756P-201ENST00000383997 107 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 SNORA51.5-201ENST00000384126 131 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 RNA5SP237-201ENST00000410414 113 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 AL512310.8-201ENST00000550183 120 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 RNU6-94P-201ENST00000607728 107 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 MIR6504-201ENST00000613520 61 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 AL353770.2-201ENST00000620024 78 ntBASIC1.69□□□□□ -2.14
HERVK_113P62684 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HERVK_113P62684 Y_RNA.224-201ENST00000364308 111 ntBASIC1.68□□□□□ -2.14
HERVK_113P62684 RNU4-67P-201ENST00000364569 141 ntBASIC1.68□□□□□ -2.14
HERVK_113P62684 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
HERVK_113P62684 MIR1302-7-201ENST00000408841 72 ntBASIC1.68□□□□□ -2.14
HERVK_113P62684 SNORA7.5-201ENST00000410672 110 ntBASIC1.68□□□□□ -2.14
HERVK_113P62684 AC141557.1-201ENST00000540982 400 ntBASIC1.68□□□□□ -2.14
HERVK_113P62684 FAM71BP1-201ENST00000604431 523 ntBASIC1.68□□□□□ -2.14
HERVK_113P62684 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HERVK_113P62684 RNA5SP264-201ENST00000363115 107 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 RNU6-409P-201ENST00000384114 104 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HERVK_113P62684 RNU6-205P-201ENST00000390858 107 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.67□□□□□ -2.14
HERVK_113P62684 AC244023.1-201ENST00000426884 112 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 RNU1-123P-201ENST00000458950 160 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 RNU7-79P-201ENST00000516082 62 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 RNU6-165P-201ENST00000517170 99 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 MIR4422-201ENST00000581938 83 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 AP000753.3-201ENST00000604083 169 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 AC242498.1-201ENST00000604134 111 ntBASIC1.67□□□□□ -2.14
HERVK_113P62684 RNU6-363P-201ENST00000362895 105 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU6-32P-201ENST00000383948 107 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU6-13P-201ENST00000384248 107 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU6-12P-201ENST00000384604 107 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU6-41P-201ENST00000384741 107 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU1-78P-201ENST00000391248 165 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU6-733P-201ENST00000410759 104 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RPS27P16-201ENST00000425758 201 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 MIR2115-201ENST00000516657 100 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RN7SKP88-201ENST00000516847 250 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU7-35P-201ENST00000517174 62 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 7SK.8-201ENST00000612110 250 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 7SK.11-201ENST00000615477 250 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 7SK.13-201ENST00000622040 250 ntBASIC1.66□□□□□ -2.14
HERVK_113P62684 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.66□□□□□ -2.14
HERVK_113P62684 RNU6-766P-201ENST00000362478 107 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 RNU6-53P-201ENST00000365367 106 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 RNU6-1113P-201ENST00000384348 107 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 Y_RNA.495-201ENST00000384435 112 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 MIR588-201ENST00000384900 83 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 MIR1185-1-201ENST00000408598 86 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 RNU6-168P-201ENST00000516189 101 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 RNU6-521P-201ENST00000516663 105 ntBASIC1.65□□□□□ -2.15
HERVK_113P62684 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
HERVK_113P62684 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HERVK_113P62684 Y_RNA.328-201ENST00000365208 113 ntBASIC1.64□□□□□ -2.15
HERVK_113P62684 MIR605-201ENST00000385078 83 ntBASIC1.64□□□□□ -2.15
HERVK_113P62684 RNA5SP89-201ENST00000410300 108 ntBASIC1.64□□□□□ -2.15
HERVK_113P62684 SNORA19.1-201ENST00000410656 129 ntBASIC1.64□□□□□ -2.15
HERVK_113P62684 SNORD67.1-201ENST00000516618 108 ntBASIC1.64□□□□□ -2.15
HERVK_113P62684 RNA5SP102-201ENST00000516865 106 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 180.6 ms