Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 SNORA42.1-201ENST00000363515 137 ntBASIC0.01□□□□□ -2.41
MSH6P52701 RNU6-949P-201ENST00000384040 107 ntBASIC0.01□□□□□ -2.41
MSH6P52701 RNU6-561P-201ENST00000516222 102 ntBASIC0.01□□□□□ -2.41
MSH6P52701 RNU6-135P-201ENST00000516769 101 ntBASIC0.01□□□□□ -2.41
MSH6P52701 MIR3171-201ENST00000584270 74 ntBASIC0.01□□□□□ -2.41
MSH6P52701 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.01□□□□□ -2.41
MSH6P52701 MIR6755-201ENST00000619993 66 ntBASIC0.01□□□□□ -2.41
MSH6P52701 Y_RNA.32-201ENST00000362589 110 ntBASIC0□□□□□ -2.41
MSH6P52701 RNU6-848P-201ENST00000515948 107 ntBASIC0□□□□□ -2.41
MSH6P52701 RNU6-617P-201ENST00000516147 107 ntBASIC0□□□□□ -2.41
MSH6P52701 RNU6-473P-201ENST00000516164 107 ntBASIC0□□□□□ -2.41
MSH6P52701 RNU6-1049P-201ENST00000516414 107 ntBASIC0□□□□□ -2.41
MSH6P52701 RNA5SP47-201ENST00000517230 109 ntBASIC0□□□□□ -2.41
MSH6P52701 MIR4282-201ENST00000583613 67 ntBASIC0□□□□□ -2.41
MSH6P52701 AL365205.2-201ENST00000594586 68 ntBASIC0□□□□□ -2.41
MSH6P52701 MIR7107-201ENST00000611489 80 ntBASIC0□□□□□ -2.41
MSH6P52701 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
MSH6P52701 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 RNU6-381P-201ENST00000391259 108 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 SEPT7P4-201ENST00000437076 306 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 RNU6-570P-201ENST00000517051 105 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 AC020661.2-201ENST00000560114 134 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 AL365265.1-201ENST00000621045 234 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 AC021613.1-201ENST00000623880 111 ntBASIC-0.01□□□□□ -2.41
MSH6P52701 Y_RNA.237-201ENST00000364439 102 ntBASIC-0.02□□□□□ -2.41
MSH6P52701 RNU6-728P-201ENST00000365375 104 ntBASIC-0.02□□□□□ -2.41
MSH6P52701 SNORA20-201ENST00000384662 132 ntBASIC-0.02□□□□□ -2.41
MSH6P52701 SNORD28-201ENST00000384706 75 ntBASIC-0.02□□□□□ -2.41
MSH6P52701 RNU6-985P-201ENST00000410182 104 ntBASIC-0.02□□□□□ -2.41
MSH6P52701 RNU4-43P-201ENST00000410628 137 ntBASIC-0.02□□□□□ -2.41
MSH6P52701 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.02□□□□□ -2.41
MSH6P52701 SNORA22.1-201ENST00000362701 134 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 SNORD95.1-201ENST00000364099 68 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 RNU6-302P-201ENST00000365249 107 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 RNU6V-201ENST00000384105 107 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 RNU6-291P-201ENST00000384720 107 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 SNORA79-201ENST00000408376 140 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 SUMO1P3-201ENST00000439961 304 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 AC091304.10-201ENST00000641554 121 ntBASIC-0.03□□□□□ -2.41
MSH6P52701 MIR335-201ENST00000362173 94 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 RNY1P13-201ENST00000365030 105 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 RNA5SP227-201ENST00000516184 113 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.04□□□□□ -2.42
MSH6P52701 AC141557.1-201ENST00000540982 400 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 MTND5P34-201ENST00000568888 325 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 MIR4639-201ENST00000584938 69 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 AC104408.1-201ENST00000605241 170 ntBASIC-0.04□□□□□ -2.42
MSH6P52701 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 SNORA18-201ENST00000384416 132 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 RNU6-535P-201ENST00000384722 107 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 PCNPP3-201ENST00000393579 471 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 RNU6-893P-201ENST00000458841 100 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 SCARNA15-202ENST00000516881 127 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 AL442663.2-201ENST00000554385 511 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 U2.14-201ENST00000615943 113 ntBASIC-0.05□□□□□ -2.42
MSH6P52701 MIR101-1-201ENST00000362265 75 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 SNORA72.6-201ENST00000384520 129 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 Y_RNA.590-201ENST00000410140 107 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 RNA5SP266-201ENST00000410273 108 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 SNORA25.16-201ENST00000516741 121 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 RNU7-70P-201ENST00000516941 66 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 MIR4645-201ENST00000583158 77 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 MIR4290-201ENST00000583807 95 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 AL442067.1-201ENST00000613261 223 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 RNU6-187P-201ENST00000384139 106 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 MTND4LP11-201ENST00000422184 280 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 RPS29P8-201ENST00000445109 171 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 AL117351.2-201ENST00000513571 157 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 AC244669.1-204ENST00000621564 178 ntBASIC-0.06□□□□□ -2.42
MSH6P52701 RNU6-103P-201ENST00000363686 107 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 SNORA33.2-201ENST00000365413 134 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 RNU6-46P-201ENST00000383860 107 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 RNU7-79P-201ENST00000516082 62 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 Y_RNA.679-201ENST00000516416 91 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 SNORD116-25-201ENST00000516517 92 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 MIR378D2-201ENST00000580636 98 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.07□□□□□ -2.42
MSH6P52701 RNU6-978P-201ENST00000364371 103 ntBASIC-0.08□□□□□ -2.42
MSH6P52701 MIR214-201ENST00000385214 110 ntBASIC-0.08□□□□□ -2.42
MSH6P52701 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.08□□□□□ -2.42
MSH6P52701 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.08□□□□□ -2.42
MSH6P52701 MIR4744-201ENST00000581563 82 ntBASIC-0.08□□□□□ -2.42
MSH6P52701 MTND5P32-201ENST00000560711 1802 ntBASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 211 ms