Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 RNU6-902P-201ENST00000517212 91 ntBASIC1.46□□□□□ -2.18
RHOP08100 MIR548AE2-201ENST00000583456 67 ntBASIC1.46□□□□□ -2.18
RHOP08100 AC087741.2-201ENST00000619415 172 ntBASIC1.46□□□□□ -2.18
RHOP08100 SNORD38B-202ENST00000625943 69 ntBASIC1.46□□□□□ -2.18
RHOP08100 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RHOP08100 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.45□□□□□ -2.18
RHOP08100 Y_RNA.344-201ENST00000365381 112 ntBASIC1.45□□□□□ -2.18
RHOP08100 Y_RNA.549-201ENST00000384657 102 ntBASIC1.45□□□□□ -2.18
RHOP08100 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
RHOP08100 RNU1-123P-201ENST00000458950 160 ntBASIC1.45□□□□□ -2.18
RHOP08100 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.45□□□□□ -2.18
RHOP08100 MIR6504-201ENST00000613520 61 ntBASIC1.45□□□□□ -2.18
RHOP08100 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
RHOP08100 RNU6-53P-201ENST00000365367 106 ntBASIC1.44□□□□□ -2.18
RHOP08100 MT-TN-201ENST00000387400 73 ntBASIC1.44□□□□□ -2.18
RHOP08100 MIR1185-1-201ENST00000408598 86 ntBASIC1.44□□□□□ -2.18
RHOP08100 RNU6-1054P-201ENST00000411293 104 ntBASIC1.44□□□□□ -2.18
RHOP08100 MIR1270-201ENST00000459320 83 ntBASIC1.44□□□□□ -2.18
RHOP08100 snoU13.18-201ENST00000459483 104 ntBASIC1.44□□□□□ -2.18
RHOP08100 RPL39P34-201ENST00000477141 156 ntBASIC1.44□□□□□ -2.18
RHOP08100 RNU7-6P-201ENST00000516845 62 ntBASIC1.44□□□□□ -2.18
RHOP08100 PRELID3BP2-201ENST00000605362 201 ntBASIC1.44□□□□□ -2.18
RHOP08100 AL589743.1-201ENST00000551932 2712 ntBASIC1.44□□□□□ -2.18
RHOP08100 MIR377-201ENST00000362145 69 ntBASIC1.43□□□□□ -2.18
RHOP08100 Y_RNA.49-201ENST00000362714 112 ntBASIC1.43□□□□□ -2.18
RHOP08100 RNA5SP264-201ENST00000363115 107 ntBASIC1.43□□□□□ -2.18
RHOP08100 RNU6-1107P-201ENST00000364817 104 ntBASIC1.43□□□□□ -2.18
RHOP08100 Y_RNA.323-201ENST00000365157 109 ntBASIC1.43□□□□□ -2.18
RHOP08100 RNU6-396P-201ENST00000365369 105 ntBASIC1.43□□□□□ -2.18
RHOP08100 MIR320A-201ENST00000385302 82 ntBASIC1.43□□□□□ -2.18
RHOP08100 RNU6-947P-201ENST00000516264 106 ntBASIC1.43□□□□□ -2.18
RHOP08100 MIR2115-201ENST00000516657 100 ntBASIC1.43□□□□□ -2.18
RHOP08100 RNA5SP102-201ENST00000516865 106 ntBASIC1.43□□□□□ -2.18
RHOP08100 RNU7-35P-201ENST00000517174 62 ntBASIC1.43□□□□□ -2.18
RHOP08100 RNU6-94P-201ENST00000607728 107 ntBASIC1.43□□□□□ -2.18
RHOP08100 MIR6078-201ENST00000611069 100 ntBASIC1.43□□□□□ -2.18
RHOP08100 SNORA25.3-201ENST00000363205 127 ntBASIC1.42□□□□□ -2.18
RHOP08100 SNORD77B-201ENST00000391112 67 ntBASIC1.42□□□□□ -2.18
RHOP08100 RNU6-613P-201ENST00000410412 108 ntBASIC1.42□□□□□ -2.18
RHOP08100 PDCD5P2-201ENST00000507570 312 ntBASIC1.42□□□□□ -2.18
RHOP08100 MIR4264-201ENST00000583520 66 ntBASIC1.42□□□□□ -2.18
RHOP08100 AL162726.3-218ENST00000636401 95 ntBASIC1.42□□□□□ -2.18
RHOP08100 MIR103A2-201ENST00000362154 78 ntBASIC1.41□□□□□ -2.18
RHOP08100 RNU6-153P-201ENST00000364422 104 ntBASIC1.41□□□□□ -2.18
RHOP08100 Y_RNA.309-201ENST00000365046 111 ntBASIC1.41□□□□□ -2.18
RHOP08100 SNORA22-201ENST00000383907 134 ntBASIC1.41□□□□□ -2.18
RHOP08100 SNORA18-201ENST00000384416 132 ntBASIC1.41□□□□□ -2.18
RHOP08100 RNU6-342P-201ENST00000384521 104 ntBASIC1.41□□□□□ -2.18
RHOP08100 RNU6-1086P-201ENST00000410930 100 ntBASIC1.41□□□□□ -2.18
RHOP08100 AC244023.1-201ENST00000426884 112 ntBASIC1.41□□□□□ -2.18
RHOP08100 RNU1-98P-201ENST00000458992 160 ntBASIC1.41□□□□□ -2.18
RHOP08100 AC242498.1-201ENST00000604134 111 ntBASIC1.41□□□□□ -2.18
RHOP08100 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
RHOP08100 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
RHOP08100 SNORA63.4-201ENST00000362763 126 ntBASIC1.4□□□□□ -2.19
RHOP08100 SNORA63.5-201ENST00000363548 123 ntBASIC1.4□□□□□ -2.19
RHOP08100 Y_RNA.191-201ENST00000363972 113 ntBASIC1.4□□□□□ -2.19
RHOP08100 MIR489-201ENST00000384923 84 ntBASIC1.4□□□□□ -2.19
RHOP08100 MIR563-201ENST00000385080 79 ntBASIC1.4□□□□□ -2.19
RHOP08100 MIR1912-201ENST00000410389 80 ntBASIC1.4□□□□□ -2.19
RHOP08100 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
RHOP08100 snoU13.2-201ENST00000459201 104 ntBASIC1.4□□□□□ -2.19
RHOP08100 AC004223.1-201ENST00000479840 271 ntBASIC1.4□□□□□ -2.19
RHOP08100 RN7SKP88-201ENST00000516847 250 ntBASIC1.4□□□□□ -2.19
RHOP08100 7SK.8-201ENST00000612110 250 ntBASIC1.4□□□□□ -2.19
RHOP08100 7SK.11-201ENST00000615477 250 ntBASIC1.4□□□□□ -2.19
RHOP08100 7SK.13-201ENST00000622040 250 ntBASIC1.4□□□□□ -2.19
RHOP08100 MIR6516-201ENST00000630554 81 ntBASIC1.4□□□□□ -2.19
RHOP08100 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.4□□□□□ -2.19
RHOP08100 RNU6-106P-201ENST00000384405 107 ntBASIC1.39□□□□□ -2.19
RHOP08100 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.39□□□□□ -2.19
RHOP08100 AC068339.1-201ENST00000526965 141 ntBASIC1.39□□□□□ -2.19
RHOP08100 MIR5009-201ENST00000578736 100 ntBASIC1.39□□□□□ -2.19
RHOP08100 AP000753.3-201ENST00000604083 169 ntBASIC1.39□□□□□ -2.19
RHOP08100 AL161722.3-201ENST00000605789 2983 ntBASIC1.39□□□□□ -2.19
RHOP08100 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RHOP08100 U8.6-201ENST00000364939 135 ntBASIC1.38□□□□□ -2.19
RHOP08100 RNU6-1014P-201ENST00000383940 103 ntBASIC1.38□□□□□ -2.19
RHOP08100 SNORA32-201ENST00000384072 121 ntBASIC1.38□□□□□ -2.19
RHOP08100 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
RHOP08100 MIR3660-201ENST00000584845 100 ntBASIC1.38□□□□□ -2.19
RHOP08100 Y_RNA.773-201ENST00000607168 90 ntBASIC1.38□□□□□ -2.19
RHOP08100 uc_338.28-201ENST00000612082 187 ntBASIC1.38□□□□□ -2.19
RHOP08100 AL662814.1-201ENST00000617364 121 ntBASIC1.38□□□□□ -2.19
RHOP08100 RNU6-363P-201ENST00000362895 105 ntBASIC1.37□□□□□ -2.19
RHOP08100 Y_RNA.163-201ENST00000363702 113 ntBASIC1.37□□□□□ -2.19
RHOP08100 RNU6-580P-201ENST00000365159 107 ntBASIC1.37□□□□□ -2.19
RHOP08100 RNU6-816P-201ENST00000390914 107 ntBASIC1.37□□□□□ -2.19
RHOP08100 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
RHOP08100 RNU6-1268P-201ENST00000391214 107 ntBASIC1.37□□□□□ -2.19
RHOP08100 RNU6-1239P-201ENST00000391310 107 ntBASIC1.37□□□□□ -2.19
RHOP08100 RNU6-554P-201ENST00000410466 106 ntBASIC1.37□□□□□ -2.19
RHOP08100 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.37□□□□□ -2.19
RHOP08100 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.37□□□□□ -2.19
RHOP08100 MIR4452-201ENST00000583004 71 ntBASIC1.37□□□□□ -2.19
RHOP08100 SNORA4-201ENST00000584302 138 ntBASIC1.37□□□□□ -2.19
RHOP08100 MIR1255B1-201ENST00000636325 63 ntBASIC1.37□□□□□ -2.19
RHOP08100 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
RHOP08100 RNU6-616P-201ENST00000384353 107 ntBASIC1.36□□□□□ -2.19
RHOP08100 Y_RNA.507-201ENST00000384500 99 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms