Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 SNORD33.1-201ENST00000516213 88 ntBASIC1.01□□□□□ -2.25
ITM2AO43736 RNU7-40P-201ENST00000516397 64 ntBASIC1.01□□□□□ -2.25
ITM2AO43736 AL359881.1-201ENST00000602916 267 ntBASIC1.01□□□□□ -2.25
ITM2AO43736 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
ITM2AO43736 RNA5SP205-201ENST00000364653 136 ntBASIC1□□□□□ -2.25
ITM2AO43736 MIR618-201ENST00000385287 98 ntBASIC1□□□□□ -2.25
ITM2AO43736 MIR764-201ENST00000390811 85 ntBASIC1□□□□□ -2.25
ITM2AO43736 U8.15-201ENST00000390947 134 ntBASIC1□□□□□ -2.25
ITM2AO43736 SNORA11.2-201ENST00000408318 127 ntBASIC1□□□□□ -2.25
ITM2AO43736 MIR1261-201ENST00000408659 82 ntBASIC1□□□□□ -2.25
ITM2AO43736 RNU6-479P-201ENST00000516348 105 ntBASIC1□□□□□ -2.25
ITM2AO43736 Y_RNA.773-201ENST00000607168 90 ntBASIC1□□□□□ -2.25
ITM2AO43736 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
ITM2AO43736 Y_RNA.299-201ENST00000364973 94 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 RNU6-934P-201ENST00000365154 107 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 Y_RNA.346-201ENST00000365385 112 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 RNA5SP237-201ENST00000410414 113 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 MIR18B-201ENST00000454574 71 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 RNU7-6P-201ENST00000516845 62 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.99□□□□□ -2.25
ITM2AO43736 AC020891.4-201ENST00000605745 93 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.99□□□□□ -2.25
ITM2AO43736 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
ITM2AO43736 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
ITM2AO43736 SNORA25.8-201ENST00000364831 128 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 RNU6-949P-201ENST00000384040 107 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 MT-TF-201ENST00000387314 71 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 RNU6-1307P-201ENST00000391012 103 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 AL591806.2-201ENST00000433122 173 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 RNU6-62P-201ENST00000516526 102 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 SNORD67.1-201ENST00000516618 108 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 SNORA4-201ENST00000584302 138 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 AL589743.1-201ENST00000551932 2712 ntBASIC0.98□□□□□ -2.25
ITM2AO43736 Y_RNA.213-201ENST00000364178 111 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 Y_RNA.344-201ENST00000365381 112 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 RNU6-1154P-201ENST00000391001 104 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 RPS26P5-201ENST00000418544 335 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 RNU7-137P-201ENST00000516788 62 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 MIR4771-2-201ENST00000577758 74 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 MIR3163-201ENST00000581592 73 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 MIR4771-1-201ENST00000582617 74 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 U6.95-201ENST00000636931 70 ntBASIC0.97□□□□□ -2.25
ITM2AO43736 SNORD115-19-201ENST00000363098 82 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 SNORD115-18-201ENST00000363293 82 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 SNORD115-17-201ENST00000364612 82 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 RNU6-616P-201ENST00000384353 107 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 MIR548D2-201ENST00000384955 97 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 RNU2-51P-201ENST00000410708 197 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 AL157834.3-201ENST00000615543 103 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 MIR1255B1-201ENST00000636325 63 ntBASIC0.96□□□□□ -2.26
ITM2AO43736 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.96□□□□□ -2.26
ITM2AO43736 MIR1827-201ENST00000408549 66 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 RNU6-994P-201ENST00000410507 111 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 AP1B1P2-201ENST00000416196 106 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 Y_RNA.649-201ENST00000459077 103 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 RN7SL429P-201ENST00000479090 223 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 RN7SL489P-201ENST00000486185 223 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 RN7SL327P-201ENST00000488659 223 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 RNU6-313P-201ENST00000516317 112 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 RN7SL853P-201ENST00000617250 223 ntBASIC0.95□□□□□ -2.26
ITM2AO43736 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.95□□□□□ -2.26
ITM2AO43736 AC023934.1-201ENST00000574529 2389 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 RNU6-1335P-201ENST00000365426 107 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 Y_RNA.549-201ENST00000384657 102 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 MIR548A1-201ENST00000385041 97 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 MIR4676-201ENST00000583078 72 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 AC105081.1-201ENST00000617727 106 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 AL035470.1-201ENST00000622571 220 ntBASIC0.94□□□□□ -2.26
ITM2AO43736 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
ITM2AO43736 AL391516.1-201ENST00000554380 2449 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 Y_RNA.362-201ENST00000365518 110 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 MIR200A-201ENST00000384875 90 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 MIR759-201ENST00000390224 91 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
ITM2AO43736 MIR548I2-201ENST00000408348 149 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 AC108667.1-201ENST00000428618 249 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 MIR4804-201ENST00000581683 73 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 FAM71BP1-201ENST00000604431 523 ntBASIC0.93□□□□□ -2.26
ITM2AO43736 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
ITM2AO43736 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.93□□□□□ -2.26
ITM2AO43736 SNORD114-10-201ENST00000363409 72 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 RNY4P6-201ENST00000363667 96 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 SNORD114-24-201ENST00000365029 72 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
ITM2AO43736 MIR206-201ENST00000384872 86 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 MIR125B2-201ENST00000385128 89 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 MIR548A3-201ENST00000385297 97 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 SNORD89-201ENST00000390981 114 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 MIR942-201ENST00000401111 86 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.92□□□□□ -2.26
ITM2AO43736 AC007012.1-201ENST00000567192 175 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 215.6 ms