Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 MIR3658-201ENST00000636291 56 ntBASIC0.57□□□□□ -2.32
NKX6-3A6NJ46 MIR6844-201ENST00000637122 62 ntBASIC0.57□□□□□ -2.32
NKX6-3A6NJ46 Y_RNA.430-201ENST00000384081 110 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 RNY1P6-201ENST00000384193 109 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 SNORA18-201ENST00000384416 132 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 RNU6-342P-201ENST00000384521 104 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 MT-TF-201ENST00000387314 71 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 RNU6-861P-201ENST00000516745 106 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 AC072026.1-201ENST00000605023 201 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 MIR6841-201ENST00000637129 72 ntBASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
NKX6-3A6NJ46 RNU6-403P-201ENST00000363163 104 ntBASIC0.55□□□□□ -2.32
NKX6-3A6NJ46 RNU4-83P-201ENST00000410863 133 ntBASIC0.55□□□□□ -2.32
NKX6-3A6NJ46 RNU6-1258P-201ENST00000516911 111 ntBASIC0.55□□□□□ -2.32
NKX6-3A6NJ46 AC141846.1-201ENST00000568348 142 ntBASIC0.55□□□□□ -2.32
NKX6-3A6NJ46 MIR6515-201ENST00000619843 57 ntBASIC0.55□□□□□ -2.32
NKX6-3A6NJ46 RNU6-200P-201ENST00000364743 107 ntBASIC0.54□□□□□ -2.32
NKX6-3A6NJ46 RNU6-690P-201ENST00000365242 106 ntBASIC0.54□□□□□ -2.32
NKX6-3A6NJ46 RNU6-679P-201ENST00000391003 106 ntBASIC0.54□□□□□ -2.32
NKX6-3A6NJ46 RNU5E-9P-201ENST00000411164 104 ntBASIC0.54□□□□□ -2.32
NKX6-3A6NJ46 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.54□□□□□ -2.32
NKX6-3A6NJ46 Y_RNA.757-201ENST00000578934 114 ntBASIC0.54□□□□□ -2.32
NKX6-3A6NJ46 MIR18A-201ENST00000362310 71 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 RNY1P11-201ENST00000363759 113 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 SNORA32-201ENST00000384072 121 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 SNORA72.6-201ENST00000384520 129 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 U8.15-201ENST00000390947 134 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 RNU6-239P-201ENST00000390990 99 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 SNORA75.5-201ENST00000391291 81 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 AC004812.1-201ENST00000540773 146 ntBASIC0.53□□□□□ -2.32
NKX6-3A6NJ46 Y_RNA.497-201ENST00000384447 98 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 RNA5SP144-201ENST00000410846 116 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.617-201ENST00000410920 90 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 RNU7-113P-201ENST00000459273 62 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 AC074198.2-201ENST00000508153 258 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 RNU5E-3P-201ENST00000515913 68 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 uc_338.17-201ENST00000619633 179 ntBASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.52□□□□□ -2.33
NKX6-3A6NJ46 RNU6-349P-201ENST00000362402 107 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.13-201ENST00000362403 112 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.29-201ENST00000362570 113 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 RNU6-508P-201ENST00000363231 103 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 RNU4-84P-201ENST00000364200 139 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.470-201ENST00000384307 117 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.540-201ENST00000384638 111 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 MIR140-201ENST00000385282 100 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 MT-TG-201ENST00000387429 68 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 RNU6-1086P-201ENST00000410930 100 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 RNA5SP436-201ENST00000516020 115 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.662-201ENST00000516028 97 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 RNU6-240P-201ENST00000516098 97 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 RNA5SP236-201ENST00000516169 116 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 AC090897.1-201ENST00000580909 226 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 SNORD92-201ENST00000585078 85 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 PVT1_3.1-201ENST00000620853 95 ntBASIC0.51□□□□□ -2.33
NKX6-3A6NJ46 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 RNU6-682P-201ENST00000363843 106 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.257-201ENST00000364596 102 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 MIR598-201ENST00000384868 97 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 MIR92A1-201ENST00000385233 78 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 AL022718.1-201ENST00000412004 84 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 AL512326.2-201ENST00000426359 151 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 RNU6-893P-201ENST00000458841 100 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 RNA5SP33-201ENST00000516687 98 ntBASIC0.5□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.240-201ENST00000364469 95 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 RNY1P13-201ENST00000365030 105 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 RNA5SP117-201ENST00000365294 118 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 RNU7-120P-201ENST00000459334 63 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 AC002350.1-201ENST00000490759 375 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 RNA5SP121-201ENST00000516537 101 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 SNORA81.3-201ENST00000517283 198 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 RNU2-60P-201ENST00000517290 128 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 MIR8066-201ENST00000617280 78 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 MIR6513-201ENST00000621188 64 ntBASIC0.49□□□□□ -2.33
NKX6-3A6NJ46 SNORD18B-201ENST00000365659 72 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.584-201ENST00000391090 114 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 RNU7-79P-201ENST00000516082 62 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.686-201ENST00000516548 134 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 RNU6-448P-201ENST00000517052 107 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 MIR4491-201ENST00000581087 68 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 MIR4305-201ENST00000583252 102 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 DNAJC19P2-201ENST00000593340 302 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 AC004792.1-201ENST00000614523 137 ntBASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.48□□□□□ -2.33
NKX6-3A6NJ46 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.42-201ENST00000362660 108 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 RNU4-11P-201ENST00000365287 132 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 RNU6-949P-201ENST00000384040 107 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 Y_RNA.588-201ENST00000391254 102 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 MTATP6P21-201ENST00000440681 189 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 RNU2-35P-201ENST00000516446 142 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 SNORA25.16-201ENST00000516741 121 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 AC133485.4-201ENST00000561835 220 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 AC138907.4-201ENST00000570107 226 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 AC021443.1-201ENST00000604478 211 ntBASIC0.47□□□□□ -2.33
NKX6-3A6NJ46 AC090425.1-201ENST00000610007 140 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 179.6 ms