Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 Y_RNA.298-201ENST00000364960 107 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 Y_RNA.617-201ENST00000410920 90 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 MRPL35P3-201ENST00000421557 364 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 RNU7-107P-201ENST00000459121 61 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 RNU7-113P-201ENST00000459273 62 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 RNU7-123P-201ENST00000515911 60 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 SNORD79.1-201ENST00000516069 84 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 RNY4P20-201ENST00000516678 93 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 SNORD53B-201ENST00000577887 78 ntBASIC1.47□□□□□ -2.17
CCM2LQ9NUG4 Y_RNA.71-201ENST00000362892 104 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 RNU6-392P-201ENST00000364926 101 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 RNU6-42P-201ENST00000384165 107 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 RNA5SP136-201ENST00000410906 107 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 RNU6-772P-201ENST00000516042 105 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 RNU6-1061P-201ENST00000516530 99 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 AL078603.1-201ENST00000603824 313 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 AL365222.1-201ENST00000614661 98 ntBASIC1.46□□□□□ -2.18
CCM2LQ9NUG4 SNORD116-14-201ENST00000383894 92 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 SNORD116-17-201ENST00000383929 92 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 SNORA25-201ENST00000384384 134 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 SNORD116-15-201ENST00000384445 92 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 SNORD116-19-201ENST00000384729 92 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 RNU7-21P-201ENST00000459430 62 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 AC023790.1-201ENST00000482174 347 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 AC113410.1-201ENST00000505029 247 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 RNU2-35P-201ENST00000516446 142 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 MIR4255-201ENST00000579351 72 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 MIR4452-201ENST00000583004 71 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 MIR6734-201ENST00000621166 68 ntBASIC1.45□□□□□ -2.18
CCM2LQ9NUG4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 RNA5SP327-201ENST00000362494 101 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 RNU1-42P-201ENST00000364033 160 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 RNU6-654P-201ENST00000364373 107 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.261-201ENST00000364631 102 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 SNORD58C-201ENST00000365223 64 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 SNORD113-1-201ENST00000365321 69 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 RNU6-1117P-201ENST00000384525 104 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 AC008267.6-201ENST00000441664 139 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 RNU7-90P-201ENST00000459216 62 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 RNU6-1333P-201ENST00000516162 93 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 IGKV1-22-201ENST00000524313 326 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 AL645939.4-201ENST00000604495 135 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.168-201ENST00000363740 102 ntBASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 RNU6-205P-201ENST00000390858 107 ntBASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 RNU7-62P-201ENST00000458856 62 ntBASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 RNU6-781P-201ENST00000516377 101 ntBASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 AC004812.1-201ENST00000540773 146 ntBASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 MIR7974-201ENST00000615835 79 ntBASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.43□□□□□ -2.18
CCM2LQ9NUG4 SNORD115-2-201ENST00000362842 82 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.127-201ENST00000363386 109 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 SNORA7.1-201ENST00000363750 139 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.213-201ENST00000364178 111 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 SNORD115-20-201ENST00000365099 82 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.531-201ENST00000384589 121 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 MIR1263-201ENST00000408324 86 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 AC244023.1-201ENST00000426884 112 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 COX6CP6-201ENST00000490840 228 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 RNA5SP220-201ENST00000516298 104 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 RNU1-92P-201ENST00000517017 135 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 AC242498.1-201ENST00000604134 111 ntBASIC1.42□□□□□ -2.18
CCM2LQ9NUG4 RNU6-60P-201ENST00000364792 103 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 RNU6-22P-201ENST00000384355 107 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 SNORA2B-201ENST00000384583 137 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 SNORD12C-201ENST00000386307 89 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 RNA5SP95-201ENST00000410319 137 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 RNA5SP237-201ENST00000410414 113 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 AC063976.4-201ENST00000421971 163 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 AL512326.2-201ENST00000426359 151 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 snoU13.2-201ENST00000459201 104 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 RNU6-62P-201ENST00000516526 102 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 RNU6-1258P-201ENST00000516911 111 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 Y_RNA.712-201ENST00000517011 92 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 AC019288.1-201ENST00000557918 224 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 AL157834.3-201ENST00000615543 103 ntBASIC1.41□□□□□ -2.18
CCM2LQ9NUG4 SNORD113.3-201ENST00000364630 78 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 MIR588-201ENST00000384900 83 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 MIRLET7F2-201ENST00000385277 83 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 RNU6-1154P-201ENST00000391001 104 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 Y_RNA.630-201ENST00000411370 108 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 RNU6-659P-201ENST00000516454 104 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 RNA5SP33-201ENST00000516687 98 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 RNA5SP102-201ENST00000516865 106 ntBASIC1.4□□□□□ -2.19
CCM2LQ9NUG4 AC025166.1-201ENST00000612411 163 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 236.8 ms