Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC113195.1-201ENST00000579952 141 ntBASIC-0.05□□□□□ -2.42
CCDC43Q96MW1 MIR5190-201ENST00000581537 80 ntBASIC-0.05□□□□□ -2.42
CCDC43Q96MW1 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-0.05□□□□□ -2.42
CCDC43Q96MW1 MIR6828-201ENST00000636181 60 ntBASIC-0.05□□□□□ -2.42
CCDC43Q96MW1 RNA5SP257-201ENST00000363023 116 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 SNORA22B-201ENST00000383876 138 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 AC096949.1-201ENST00000412047 152 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 MIR4305-201ENST00000583252 102 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 MIR5197-201ENST00000583721 112 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 MTND4P29-201ENST00000503122 1372 ntBASIC-0.06□□□□□ -2.42
CCDC43Q96MW1 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.07□□□□□ -2.42
CCDC43Q96MW1 SNORA20-201ENST00000384662 132 ntBASIC-0.07□□□□□ -2.42
CCDC43Q96MW1 MIR616-201ENST00000385293 97 ntBASIC-0.07□□□□□ -2.42
CCDC43Q96MW1 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.07□□□□□ -2.42
CCDC43Q96MW1 RNU6-765P-201ENST00000516916 99 ntBASIC-0.07□□□□□ -2.42
CCDC43Q96MW1 RNA5SP47-201ENST00000517230 109 ntBASIC-0.07□□□□□ -2.42
CCDC43Q96MW1 MTND5P34-201ENST00000568888 325 ntBASIC-0.07□□□□□ -2.42
CCDC43Q96MW1 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.08□□□□□ -2.42
CCDC43Q96MW1 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.08□□□□□ -2.42
CCDC43Q96MW1 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.08□□□□□ -2.42
CCDC43Q96MW1 RNU6-291P-201ENST00000384720 107 ntBASIC-0.08□□□□□ -2.42
CCDC43Q96MW1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CCDC43Q96MW1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.08□□□□□ -2.42
CCDC43Q96MW1 RNU6-135P-201ENST00000516769 101 ntBASIC-0.08□□□□□ -2.42
CCDC43Q96MW1 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 Y_RNA.128-201ENST00000363391 112 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 Y_RNA.509-201ENST00000384506 99 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 RNU6-535P-201ENST00000384722 107 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 RNU7-129P-201ENST00000516128 62 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 AC091304.10-201ENST00000641554 121 ntBASIC-0.09□□□□□ -2.42
CCDC43Q96MW1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 SNORA22.1-201ENST00000362701 134 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 RNU6-949P-201ENST00000384040 107 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 SNORD28-201ENST00000384706 75 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 MIR643-201ENST00000385267 97 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 RNU6-651P-201ENST00000411040 105 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 AC113618.1-201ENST00000416747 285 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 RNU6-561P-201ENST00000516222 102 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 SNORA25.16-201ENST00000516741 121 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 MIR4290-201ENST00000583807 95 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 AL160413.1-201ENST00000622780 310 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 MIR6841-201ENST00000637129 72 ntBASIC-0.1□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.11□□□□□ -2.43
CCDC43Q96MW1 RNA5SP325-201ENST00000363756 130 ntBASIC-0.11□□□□□ -2.43
CCDC43Q96MW1 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.11□□□□□ -2.43
CCDC43Q96MW1 TRBVB-201ENST00000477100 408 ntBASIC-0.11□□□□□ -2.43
CCDC43Q96MW1 RNU7-70P-201ENST00000516941 66 ntBASIC-0.11□□□□□ -2.43
CCDC43Q96MW1 RNU6-570P-201ENST00000517051 105 ntBASIC-0.11□□□□□ -2.43
CCDC43Q96MW1 AC021613.1-201ENST00000623880 111 ntBASIC-0.11□□□□□ -2.43
CCDC43Q96MW1 SNORA18-201ENST00000384416 132 ntBASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 MIR760-201ENST00000390220 80 ntBASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 RNU6-127P-201ENST00000390897 107 ntBASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 MIR4752-201ENST00000579672 72 ntBASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 MIR4639-201ENST00000584938 69 ntBASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 AC244669.1-204ENST00000621564 178 ntBASIC-0.12□□□□□ -2.43
CCDC43Q96MW1 MIR610-201ENST00000385139 96 ntBASIC-0.13□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.13□□□□□ -2.43
CCDC43Q96MW1 AC134503.1-201ENST00000633048 54 ntBASIC-0.13□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 RNY1P13-201ENST00000365030 105 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 MIR329-2-201ENST00000385029 84 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 SNORA79-201ENST00000408376 140 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 SNORD2.1-201ENST00000458762 69 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 MIR4680-201ENST00000580906 66 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.14□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 MIR593-201ENST00000384856 100 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 RNU6-848P-201ENST00000515948 107 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 RNU6-617P-201ENST00000516147 107 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 RNU6-473P-201ENST00000516164 107 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 MIR2909-201ENST00000617113 69 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 MIR499B-201ENST00000636498 73 ntBASIC-0.15□□□□□ -2.43
CCDC43Q96MW1 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.216-201ENST00000364205 93 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 RNA5SP245-201ENST00000364239 121 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 RNU6-728P-201ENST00000365375 104 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 AL365205.2-201ENST00000594586 68 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 AL442067.1-201ENST00000613261 223 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 AL365265.1-201ENST00000621045 234 ntBASIC-0.16□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 RNU4-16P-201ENST00000364737 141 ntBASIC-0.17□□□□□ -2.44
CCDC43Q96MW1 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms