Protein–RNA interactions for Protein: Q07011

TNFRSF9, Tumor necrosis factor receptor superfamily member 9, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9Q07011 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC0.2□□□□□ -2.38
TNFRSF9Q07011 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 SNORD93-201ENST00000408813 74 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 RNY3P16-201ENST00000516338 101 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 MIR5197-201ENST00000583721 112 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 AC011921.3-201ENST00000605540 361 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 AC092634.7-201ENST00000621022 103 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 AC091932.4-201ENST00000623386 200 ntBASIC0.2□□□□□ -2.38
TNFRSF9Q07011 AL596211.1-201ENST00000569873 2277 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 MIR103A1-201ENST00000362165 78 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.11-201ENST00000362375 109 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.262-201ENST00000364641 102 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.292-201ENST00000364904 97 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 RNU4-45P-201ENST00000365469 141 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.542-201ENST00000384641 111 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 MIR606-201ENST00000384851 96 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 MT-TF-201ENST00000387314 71 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 MIR548F4-201ENST00000408515 105 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 SEPT7P4-201ENST00000437076 306 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 RNU7-80P-201ENST00000459562 61 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 SNORA25.12-201ENST00000516202 82 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 RNA5SP94-201ENST00000516917 108 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 RNU6-448P-201ENST00000517052 107 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 MIR3678-201ENST00000578455 94 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 AC008737.2-201ENST00000599446 118 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 AL442067.1-201ENST00000613261 223 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 MIR8066-201ENST00000617280 78 ntBASIC0.19□□□□□ -2.38
TNFRSF9Q07011 SNORD44.1-201ENST00000363202 61 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 RNA5SP117-201ENST00000365294 118 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 RNU4-17P-201ENST00000365598 141 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 RNU6-1292P-201ENST00000383856 107 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 U8.15-201ENST00000390947 134 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 SNORA79-201ENST00000408376 140 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.617-201ENST00000410920 90 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.18□□□□□ -2.38
TNFRSF9Q07011 AL121914.1-201ENST00000450188 156 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 MIR3152-201ENST00000579801 74 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 MIR4744-201ENST00000581563 82 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 AC006504.6-201ENST00000590142 199 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 AL365205.2-201ENST00000594586 68 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 AL662814.1-201ENST00000617364 121 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 U6.104-201ENST00000637979 90 ntBASIC0.18□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.47-201ENST00000362697 108 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 RNU4-67P-201ENST00000364569 141 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.308-201ENST00000365043 101 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.352-201ENST00000365439 102 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.430-201ENST00000384081 110 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.518-201ENST00000384552 113 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 MIR518A1-201ENST00000385068 85 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 MIR644A-201ENST00000385262 94 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 RNA5SP237-201ENST00000410414 113 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 RNA5SP261-201ENST00000410536 106 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 RNU4-43P-201ENST00000410628 137 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 RNU2-38P-201ENST00000410856 79 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 RNU4-83P-201ENST00000410863 133 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 SNORA40.8-201ENST00000411034 126 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 SNORD127-201ENST00000458892 86 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.17□□□□□ -2.38
TNFRSF9Q07011 MIR378D2-201ENST00000580636 98 ntBASIC0.17□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.13-201ENST00000362403 112 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.42-201ENST00000362660 108 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 RNU6-403P-201ENST00000363163 104 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 RNU6-103P-201ENST00000363686 107 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 RNU6-978P-201ENST00000364371 103 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.454-201ENST00000384224 113 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 RNU6-578P-201ENST00000390980 103 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 RNA5SP63-201ENST00000391225 112 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 Y_RNA.588-201ENST00000391254 102 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 RNU6-493P-201ENST00000391321 108 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 AC096949.1-201ENST00000412047 152 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 SNORD116-25-201ENST00000516517 92 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 SCARNA15-202ENST00000516881 127 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 AL117187.1-201ENST00000555482 181 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 AC133485.4-201ENST00000561835 220 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 SNORA25.18-201ENST00000607153 114 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 MIR6718-201ENST00000616153 80 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 AC021613.1-201ENST00000623880 111 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 MIR6841-201ENST00000637129 72 ntBASIC0.16□□□□□ -2.38
TNFRSF9Q07011 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.15□□□□□ -2.39
TNFRSF9Q07011 RNU6-349P-201ENST00000362402 107 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 SNORA36.1-201ENST00000363424 132 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.145-201ENST00000363527 102 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 RNY4P28-201ENST00000365281 93 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 SNORA8.2-201ENST00000384372 139 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.567-201ENST00000384736 106 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 RPL39P25-201ENST00000449384 154 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 SNRPGP12-201ENST00000449481 213 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 AC108740.1-201ENST00000498629 225 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 RNU6-1258P-201ENST00000516911 111 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 AC022523.2-201ENST00000561045 150 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 AC141846.1-201ENST00000568348 142 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 MIR4491-201ENST00000581087 68 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 RNU2-4P-201ENST00000606190 192 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.15□□□□□ -2.39
TNFRSF9Q07011 SNORA22.1-201ENST00000362701 134 ntBASIC0.14□□□□□ -2.39
TNFRSF9Q07011 Y_RNA.65-201ENST00000362846 100 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 270.6 ms