Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 AL161722.3-201ENST00000605789 2983 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 RNA5SP160-201ENST00000364866 120 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 RNU6-106P-201ENST00000384405 107 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 U8.13-201ENST00000390842 128 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 RNU6-165P-201ENST00000517170 99 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 RNU7-35P-201ENST00000517174 62 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.76□□□□□ -2.13
GFRA1P56159 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 MIR4264-201ENST00000583520 66 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 FAM71BP1-201ENST00000604431 523 ntBASIC1.76□□□□□ -2.13
GFRA1P56159 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
GFRA1P56159 RNU6-616P-201ENST00000384353 107 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 RNU6-1237P-201ENST00000384777 107 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 MT-TN-201ENST00000387400 73 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 RNU6-554P-201ENST00000410466 106 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 RNA5SP182-201ENST00000516064 82 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 RNU1-40P-201ENST00000516816 164 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 RNU1-97P-201ENST00000516872 164 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 RNU6-902P-201ENST00000517212 91 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 AP003716.2-201ENST00000528260 108 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 Y_RNA.773-201ENST00000607168 90 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 MIR1255B1-201ENST00000636325 63 ntBASIC1.75□□□□□ -2.13
GFRA1P56159 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
GFRA1P56159 Y_RNA.155-201ENST00000363632 101 ntBASIC1.74□□□□□ -2.13
GFRA1P56159 RNU4-67P-201ENST00000364569 141 ntBASIC1.74□□□□□ -2.13
GFRA1P56159 RNA5SP138-201ENST00000365098 114 ntBASIC1.74□□□□□ -2.13
GFRA1P56159 MIR1185-1-201ENST00000408598 86 ntBASIC1.74□□□□□ -2.13
GFRA1P56159 RNU6-1086P-201ENST00000410930 100 ntBASIC1.74□□□□□ -2.13
GFRA1P56159 MIR1270-201ENST00000459320 83 ntBASIC1.74□□□□□ -2.13
GFRA1P56159 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.74□□□□□ -2.13
GFRA1P56159 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.74□□□□□ -2.13
GFRA1P56159 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
GFRA1P56159 RNU6-363P-201ENST00000362895 105 ntBASIC1.73□□□□□ -2.13
GFRA1P56159 RNU6-147P-201ENST00000383983 107 ntBASIC1.73□□□□□ -2.13
GFRA1P56159 RNU6-1113P-201ENST00000384348 107 ntBASIC1.73□□□□□ -2.13
GFRA1P56159 RNA5SP338-201ENST00000410495 85 ntBASIC1.73□□□□□ -2.13
GFRA1P56159 AC244023.1-201ENST00000426884 112 ntBASIC1.73□□□□□ -2.13
GFRA1P56159 RNU6-717P-201ENST00000459076 104 ntBASIC1.73□□□□□ -2.13
GFRA1P56159 AC242498.1-201ENST00000604134 111 ntBASIC1.73□□□□□ -2.13
GFRA1P56159 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.73□□□□□ -2.13
GFRA1P56159 MIR450A1-201ENST00000362262 91 ntBASIC1.72□□□□□ -2.13
GFRA1P56159 RNU6-409P-201ENST00000384114 104 ntBASIC1.72□□□□□ -2.13
GFRA1P56159 SNORA51.5-201ENST00000384126 131 ntBASIC1.72□□□□□ -2.13
GFRA1P56159 MIR588-201ENST00000384900 83 ntBASIC1.72□□□□□ -2.13
GFRA1P56159 snoU13.2-201ENST00000459201 104 ntBASIC1.72□□□□□ -2.13
GFRA1P56159 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.72□□□□□ -2.13
GFRA1P56159 RNU7-79P-201ENST00000516082 62 ntBASIC1.72□□□□□ -2.13
GFRA1P56159 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.72□□□□□ -2.13
GFRA1P56159 MIR6516-201ENST00000630554 81 ntBASIC1.72□□□□□ -2.13
GFRA1P56159 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
GFRA1P56159 RNU6-756P-201ENST00000383997 107 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 MIR764-201ENST00000390811 85 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 RNU6-205P-201ENST00000390858 107 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 RNU6-613P-201ENST00000410412 108 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 RNU6-733P-201ENST00000410759 104 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 RNU6-1054P-201ENST00000411293 104 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 RNA5SP364-201ENST00000516938 78 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 MIR6845-201ENST00000613182 61 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 AL662814.1-201ENST00000617364 121 ntBASIC1.71□□□□□ -2.14
GFRA1P56159 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.71□□□□□ -2.14
GFRA1P56159 MIR377-201ENST00000362145 69 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 RNU6-766P-201ENST00000362478 107 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 MIR583-201ENST00000384846 75 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 SNORA26.9-201ENST00000391322 122 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 AL445685.2-201ENST00000422551 342 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 AL591806.2-201ENST00000433122 173 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 RNU7-62P-201ENST00000458856 62 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 AC141846.1-201ENST00000568348 142 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 MIR4524B-201ENST00000581569 115 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 uc_338.20-201ENST00000621563 178 ntBASIC1.7□□□□□ -2.14
GFRA1P56159 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
GFRA1P56159 RNU6-32P-201ENST00000383948 107 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 RNU6-13P-201ENST00000384248 107 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 RNU6-12P-201ENST00000384604 107 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 RNU6-41P-201ENST00000384741 107 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 SNORA7.5-201ENST00000410672 110 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.69□□□□□ -2.14
GFRA1P56159 snoU13.23-201ENST00000458863 104 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 AC048334.1-201ENST00000477975 159 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 SNORA31.2-201ENST00000516019 134 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 RNU7-2P-201ENST00000516096 62 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 RNU6-521P-201ENST00000516663 105 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 MIR3613-201ENST00000579844 87 ntBASIC1.69□□□□□ -2.14
GFRA1P56159 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
GFRA1P56159 SNORA40.18-201ENST00000391200 128 ntBASIC1.68□□□□□ -2.14
GFRA1P56159 AC003989.2-201ENST00000440224 169 ntBASIC1.68□□□□□ -2.14
GFRA1P56159 SNORD67.1-201ENST00000516618 108 ntBASIC1.68□□□□□ -2.14
GFRA1P56159 AC141557.1-201ENST00000540982 400 ntBASIC1.68□□□□□ -2.14
GFRA1P56159 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.68□□□□□ -2.14
GFRA1P56159 MIR6740-201ENST00000618268 113 ntBASIC1.68□□□□□ -2.14
GFRA1P56159 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
GFRA1P56159 SNORD114-10-201ENST00000363409 72 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 RNU6-654P-201ENST00000364373 107 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 RNY1P13-201ENST00000365030 105 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 SNORD115-35-201ENST00000365122 82 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 Y_RNA.328-201ENST00000365208 113 ntBASIC1.67□□□□□ -2.14
GFRA1P56159 MIR206-201ENST00000384872 86 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 300.1 ms