Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AL512326.2-201ENST00000426359 151 ntBASIC1□□□□□ -2.25
SHC1P29353 AL133373.1-201ENST00000497098 94 ntBASIC1□□□□□ -2.25
SHC1P29353 RNU6-772P-201ENST00000516042 105 ntBASIC1□□□□□ -2.25
SHC1P29353 RNU6-1061P-201ENST00000516530 99 ntBASIC1□□□□□ -2.25
SHC1P29353 CYP3A52P-201ENST00000563326 91 ntBASIC1□□□□□ -2.25
SHC1P29353 MIR4305-201ENST00000583252 102 ntBASIC1□□□□□ -2.25
SHC1P29353 MIR8070-201ENST00000616510 88 ntBASIC1□□□□□ -2.25
SHC1P29353 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
SHC1P29353 Y_RNA.171-201ENST00000363760 102 ntBASIC0.99□□□□□ -2.25
SHC1P29353 SNORD58C-201ENST00000365223 64 ntBASIC0.99□□□□□ -2.25
SHC1P29353 RNU6-1104P-201ENST00000384723 104 ntBASIC0.99□□□□□ -2.25
SHC1P29353 MIRLET7F2-201ENST00000385277 83 ntBASIC0.99□□□□□ -2.25
SHC1P29353 MIR618-201ENST00000385287 98 ntBASIC0.99□□□□□ -2.25
SHC1P29353 MT-TI-201ENST00000387365 69 ntBASIC0.99□□□□□ -2.25
SHC1P29353 MIR1263-201ENST00000408324 86 ntBASIC0.99□□□□□ -2.25
SHC1P29353 MIR1185-1-201ENST00000408598 86 ntBASIC0.99□□□□□ -2.25
SHC1P29353 RNA5SP144-201ENST00000410846 116 ntBASIC0.99□□□□□ -2.25
SHC1P29353 RNU6-602P-201ENST00000411155 105 ntBASIC0.99□□□□□ -2.25
SHC1P29353 AC244023.1-201ENST00000426884 112 ntBASIC0.99□□□□□ -2.25
SHC1P29353 RPS29P28-201ENST00000446439 141 ntBASIC0.99□□□□□ -2.25
SHC1P29353 AC048334.1-201ENST00000477975 159 ntBASIC0.99□□□□□ -2.25
SHC1P29353 RNU6-62P-201ENST00000516526 102 ntBASIC0.99□□□□□ -2.25
SHC1P29353 AC242498.1-201ENST00000604134 111 ntBASIC0.99□□□□□ -2.25
SHC1P29353 AC021443.1-201ENST00000604478 211 ntBASIC0.99□□□□□ -2.25
SHC1P29353 MIR8065-201ENST00000620577 100 ntBASIC0.99□□□□□ -2.25
SHC1P29353 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC0.99□□□□□ -2.25
SHC1P29353 Z97988.1-201ENST00000637697 135 ntBASIC0.99□□□□□ -2.25
SHC1P29353 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SHC1P29353 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
SHC1P29353 RNU6-1154P-201ENST00000391001 104 ntBASIC0.98□□□□□ -2.25
SHC1P29353 RNU6-1054P-201ENST00000411293 104 ntBASIC0.98□□□□□ -2.25
SHC1P29353 AC008267.6-201ENST00000441664 139 ntBASIC0.98□□□□□ -2.25
SHC1P29353 RNU7-164P-201ENST00000459221 62 ntBASIC0.98□□□□□ -2.25
SHC1P29353 RNU7-123P-201ENST00000515911 60 ntBASIC0.98□□□□□ -2.25
SHC1P29353 Y_RNA.712-201ENST00000517011 92 ntBASIC0.98□□□□□ -2.25
SHC1P29353 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.98□□□□□ -2.25
SHC1P29353 MIR6841-201ENST00000637129 72 ntBASIC0.98□□□□□ -2.25
SHC1P29353 MIR3914-2-201ENST00000637339 95 ntBASIC0.98□□□□□ -2.25
SHC1P29353 RNA5SP327-201ENST00000362494 101 ntBASIC0.97□□□□□ -2.25
SHC1P29353 SNORA22.1-201ENST00000362701 134 ntBASIC0.97□□□□□ -2.25
SHC1P29353 SNORA1.1-201ENST00000364671 133 ntBASIC0.97□□□□□ -2.25
SHC1P29353 Y_RNA.298-201ENST00000364960 107 ntBASIC0.97□□□□□ -2.25
SHC1P29353 Y_RNA.363-201ENST00000365529 113 ntBASIC0.97□□□□□ -2.25
SHC1P29353 Y_RNA.430-201ENST00000384081 110 ntBASIC0.97□□□□□ -2.25
SHC1P29353 Y_RNA.470-201ENST00000384307 117 ntBASIC0.97□□□□□ -2.25
SHC1P29353 RPL39P39-201ENST00000455840 151 ntBASIC0.97□□□□□ -2.25
SHC1P29353 RNU6-479P-201ENST00000516348 105 ntBASIC0.97□□□□□ -2.25
SHC1P29353 RNY4P20-201ENST00000516678 93 ntBASIC0.97□□□□□ -2.25
SHC1P29353 RN7SKP88-201ENST00000516847 250 ntBASIC0.97□□□□□ -2.25
SHC1P29353 AC004812.1-201ENST00000540773 146 ntBASIC0.97□□□□□ -2.25
SHC1P29353 AC022523.2-201ENST00000561045 150 ntBASIC0.97□□□□□ -2.25
SHC1P29353 MIR3152-201ENST00000579801 74 ntBASIC0.97□□□□□ -2.25
SHC1P29353 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.97□□□□□ -2.25
SHC1P29353 7SK.8-201ENST00000612110 250 ntBASIC0.97□□□□□ -2.25
SHC1P29353 7SK.11-201ENST00000615477 250 ntBASIC0.97□□□□□ -2.25
SHC1P29353 7SK.13-201ENST00000622040 250 ntBASIC0.97□□□□□ -2.25
SHC1P29353 MTND5P18-201ENST00000445624 1801 ntBASIC0.96□□□□□ -2.26
SHC1P29353 RNA5SP264-201ENST00000363115 107 ntBASIC0.96□□□□□ -2.26
SHC1P29353 RNA5SP48-201ENST00000363969 126 ntBASIC0.96□□□□□ -2.26
SHC1P29353 RNA5SP205-201ENST00000364653 136 ntBASIC0.96□□□□□ -2.26
SHC1P29353 Y_RNA.291-201ENST00000364886 113 ntBASIC0.96□□□□□ -2.26
SHC1P29353 SNORA25.9-201ENST00000365087 128 ntBASIC0.96□□□□□ -2.26
SHC1P29353 Y_RNA.528-201ENST00000384575 108 ntBASIC0.96□□□□□ -2.26
SHC1P29353 Y_RNA.563-201ENST00000384707 108 ntBASIC0.96□□□□□ -2.26
SHC1P29353 RNU2-51P-201ENST00000410708 197 ntBASIC0.96□□□□□ -2.26
SHC1P29353 RNA5SP247-201ENST00000411181 105 ntBASIC0.96□□□□□ -2.26
SHC1P29353 RPS3AP1-201ENST00000413190 320 ntBASIC0.96□□□□□ -2.26
SHC1P29353 RNU6-313P-201ENST00000516317 112 ntBASIC0.96□□□□□ -2.26
SHC1P29353 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.96□□□□□ -2.26
SHC1P29353 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
SHC1P29353 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
SHC1P29353 AC025166.1-201ENST00000612411 163 ntBASIC0.96□□□□□ -2.26
SHC1P29353 MIR6516-201ENST00000630554 81 ntBASIC0.96□□□□□ -2.26
SHC1P29353 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SHC1P29353 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.95□□□□□ -2.26
SHC1P29353 SNORD114-27-201ENST00000363766 70 ntBASIC0.95□□□□□ -2.26
SHC1P29353 Y_RNA.226-201ENST00000364337 114 ntBASIC0.95□□□□□ -2.26
SHC1P29353 RNU6-654P-201ENST00000364373 107 ntBASIC0.95□□□□□ -2.26
SHC1P29353 Y_RNA.531-201ENST00000384589 121 ntBASIC0.95□□□□□ -2.26
SHC1P29353 SNORD12C-201ENST00000386307 89 ntBASIC0.95□□□□□ -2.26
SHC1P29353 MIR1276-201ENST00000408707 83 ntBASIC0.95□□□□□ -2.26
SHC1P29353 RNU6-735P-201ENST00000410612 107 ntBASIC0.95□□□□□ -2.26
SHC1P29353 AC245047.7-201ENST00000440265 293 ntBASIC0.95□□□□□ -2.26
SHC1P29353 SNORA31.2-201ENST00000516019 134 ntBASIC0.95□□□□□ -2.26
SHC1P29353 RNU7-40P-201ENST00000516397 64 ntBASIC0.95□□□□□ -2.26
SHC1P29353 RNA5SP102-201ENST00000516865 106 ntBASIC0.95□□□□□ -2.26
SHC1P29353 MIR103A2-201ENST00000362154 78 ntBASIC0.94□□□□□ -2.26
SHC1P29353 RNU6-1290P-201ENST00000362957 109 ntBASIC0.94□□□□□ -2.26
SHC1P29353 Y_RNA.353-201ENST00000365440 108 ntBASIC0.94□□□□□ -2.26
SHC1P29353 SNORD38B-201ENST00000384690 67 ntBASIC0.94□□□□□ -2.26
SHC1P29353 MIR499A-201ENST00000384903 122 ntBASIC0.94□□□□□ -2.26
SHC1P29353 RNA5SP261-201ENST00000410536 106 ntBASIC0.94□□□□□ -2.26
SHC1P29353 AL022718.1-201ENST00000412004 84 ntBASIC0.94□□□□□ -2.26
SHC1P29353 MRPL35P3-201ENST00000421557 364 ntBASIC0.94□□□□□ -2.26
SHC1P29353 AC087343.1-201ENST00000477341 475 ntBASIC0.94□□□□□ -2.26
SHC1P29353 SNORD38B-202ENST00000625943 69 ntBASIC0.94□□□□□ -2.26
SHC1P29353 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
SHC1P29353 SNORD115-2-201ENST00000362842 82 ntBASIC0.93□□□□□ -2.26
SHC1P29353 Y_RNA.198-201ENST00000364013 98 ntBASIC0.93□□□□□ -2.26
SHC1P29353 SNORD115-20-201ENST00000365099 82 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms