Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC022709.1-201ENST00000615967 87 ntBASIC2.59□□□□□ -1.99
RXRBP28702 MIR6515-201ENST00000619843 57 ntBASIC2.59□□□□□ -1.99
RXRBP28702 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RXRBP28702 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.59□□□□□ -2
RXRBP28702 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
RXRBP28702 Y_RNA.247-201ENST00000364500 92 ntBASIC2.58□□□□□ -2
RXRBP28702 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
RXRBP28702 Y_RNA.430-201ENST00000384081 110 ntBASIC2.58□□□□□ -2
RXRBP28702 SNORD28B-201ENST00000390993 75 ntBASIC2.58□□□□□ -2
RXRBP28702 RNU6-887P-201ENST00000410660 100 ntBASIC2.58□□□□□ -2
RXRBP28702 RNU7-171P-201ENST00000459581 62 ntBASIC2.58□□□□□ -2
RXRBP28702 Y_RNA.705-201ENST00000516862 110 ntBASIC2.58□□□□□ -2
RXRBP28702 MIR5094-201ENST00000578766 85 ntBASIC2.58□□□□□ -2
RXRBP28702 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.58□□□□□ -2
RXRBP28702 MIR6717-201ENST00000622747 73 ntBASIC2.58□□□□□ -2
RXRBP28702 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
RXRBP28702 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
RXRBP28702 RNU6-1125P-201ENST00000363601 107 ntBASIC2.57□□□□□ -2
RXRBP28702 Y_RNA.244-201ENST00000364484 109 ntBASIC2.57□□□□□ -2
RXRBP28702 Y_RNA.370-201ENST00000365589 108 ntBASIC2.57□□□□□ -2
RXRBP28702 SNORD116-22-201ENST00000384430 92 ntBASIC2.57□□□□□ -2
RXRBP28702 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
RXRBP28702 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.57□□□□□ -2
RXRBP28702 RNU6-279P-201ENST00000391297 101 ntBASIC2.57□□□□□ -2
RXRBP28702 Y_RNA.620-201ENST00000411009 88 ntBASIC2.57□□□□□ -2
RXRBP28702 RNU7-34P-201ENST00000459394 64 ntBASIC2.57□□□□□ -2
RXRBP28702 UBL5P1-201ENST00000507979 193 ntBASIC2.57□□□□□ -2
RXRBP28702 Y_RNA.659-201ENST00000515994 113 ntBASIC2.57□□□□□ -2
RXRBP28702 RNU6-958P-201ENST00000516995 106 ntBASIC2.57□□□□□ -2
RXRBP28702 RNU6-1006P-201ENST00000516998 103 ntBASIC2.57□□□□□ -2
RXRBP28702 MIR3126-201ENST00000577443 74 ntBASIC2.57□□□□□ -2
RXRBP28702 PVT1_3.1-201ENST00000620853 95 ntBASIC2.57□□□□□ -2
RXRBP28702 Y_RNA.221-201ENST00000364248 96 ntBASIC2.56□□□□□ -2
RXRBP28702 Y_RNA.313-201ENST00000365095 103 ntBASIC2.56□□□□□ -2
RXRBP28702 SNORD114-22-201ENST00000365423 72 ntBASIC2.56□□□□□ -2
RXRBP28702 RNU6-242P-201ENST00000384359 107 ntBASIC2.56□□□□□ -2
RXRBP28702 RNU6-1031P-201ENST00000384773 107 ntBASIC2.56□□□□□ -2
RXRBP28702 RPS29P29-201ENST00000456396 171 ntBASIC2.56□□□□□ -2
RXRBP28702 RNU1-123P-201ENST00000458950 160 ntBASIC2.56□□□□□ -2
RXRBP28702 RNU7-12P-201ENST00000516030 62 ntBASIC2.56□□□□□ -2
RXRBP28702 MIR548AR-201ENST00000582191 57 ntBASIC2.56□□□□□ -2
RXRBP28702 MIR4658-201ENST00000584344 65 ntBASIC2.56□□□□□ -2
RXRBP28702 AL020996.3-201ENST00000606617 222 ntBASIC2.56□□□□□ -2
RXRBP28702 MIR4791-201ENST00000607666 84 ntBASIC2.56□□□□□ -2
RXRBP28702 Y_RNA.178-201ENST00000363832 102 ntBASIC2.55□□□□□ -2
RXRBP28702 SNORA67.1-201ENST00000364749 141 ntBASIC2.55□□□□□ -2
RXRBP28702 RNU6-342P-201ENST00000384521 104 ntBASIC2.55□□□□□ -2
RXRBP28702 MIR526A1-201ENST00000384897 85 ntBASIC2.55□□□□□ -2
RXRBP28702 RNU6-1307P-201ENST00000391012 103 ntBASIC2.55□□□□□ -2
RXRBP28702 SNORD77B-201ENST00000391112 67 ntBASIC2.55□□□□□ -2
RXRBP28702 AL034345.1-201ENST00000407768 123 ntBASIC2.55□□□□□ -2
RXRBP28702 MIR1283-2-201ENST00000408621 87 ntBASIC2.55□□□□□ -2
RXRBP28702 AC090844.1-201ENST00000422019 156 ntBASIC2.55□□□□□ -2
RXRBP28702 AC093850.1-201ENST00000454121 251 ntBASIC2.55□□□□□ -2
RXRBP28702 RNU7-73P-201ENST00000458743 63 ntBASIC2.55□□□□□ -2
RXRBP28702 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.55□□□□□ -2
RXRBP28702 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.55□□□□□ -2
RXRBP28702 MIR3152-201ENST00000579801 74 ntBASIC2.55□□□□□ -2
RXRBP28702 MIR4668-201ENST00000582284 70 ntBASIC2.55□□□□□ -2
RXRBP28702 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RXRBP28702 Z82195.2-201ENST00000612348 18351 ntBASIC2.55□□□□□ -2
RXRBP28702 SNORA1.2-201ENST00000365189 134 ntBASIC2.54□□□□□ -2
RXRBP28702 SNORD58A-201ENST00000383875 65 ntBASIC2.54□□□□□ -2
RXRBP28702 SNORA32-201ENST00000384072 121 ntBASIC2.54□□□□□ -2
RXRBP28702 MIR597-201ENST00000384968 97 ntBASIC2.54□□□□□ -2
RXRBP28702 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.54□□□□□ -2
RXRBP28702 MIR376B-201ENST00000614515 100 ntBASIC2.54□□□□□ -2
RXRBP28702 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RXRBP28702 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.54□□□□□ -2
RXRBP28702 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
RXRBP28702 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.53□□□□□ -2
RXRBP28702 Y_RNA.96-201ENST00000363092 109 ntBASIC2.53□□□□□ -2
RXRBP28702 SNORA1.1-201ENST00000364671 133 ntBASIC2.53□□□□□ -2
RXRBP28702 MIR452-201ENST00000385020 85 ntBASIC2.53□□□□□ -2
RXRBP28702 MIR9-3-201ENST00000385084 90 ntBASIC2.53□□□□□ -2
RXRBP28702 U8.15-201ENST00000390947 134 ntBASIC2.53□□□□□ -2
RXRBP28702 RNU7-67P-201ENST00000459003 62 ntBASIC2.53□□□□□ -2
RXRBP28702 RNU7-53P-201ENST00000516705 60 ntBASIC2.53□□□□□ -2
RXRBP28702 MIR5089-201ENST00000580047 84 ntBASIC2.53□□□□□ -2
RXRBP28702 MIR4439-201ENST00000583746 80 ntBASIC2.53□□□□□ -2
RXRBP28702 SNRPGP19-201ENST00000603826 189 ntBASIC2.53□□□□□ -2
RXRBP28702 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RXRBP28702 Y_RNA.205-201ENST00000364128 113 ntBASIC2.52□□□□□ -2.01
RXRBP28702 RNU6-1163P-201ENST00000364516 107 ntBASIC2.52□□□□□ -2.01
RXRBP28702 SNORA70.7-201ENST00000384159 133 ntBASIC2.52□□□□□ -2.01
RXRBP28702 MIR136-201ENST00000385207 82 ntBASIC2.52□□□□□ -2.01
RXRBP28702 RNA5SP465-201ENST00000391195 109 ntBASIC2.52□□□□□ -2.01
RXRBP28702 AC009474.2-201ENST00000451383 136 ntBASIC2.52□□□□□ -2.01
RXRBP28702 AC099513.1-201ENST00000490423 301 ntBASIC2.52□□□□□ -2.01
RXRBP28702 RNU6-857P-201ENST00000515893 110 ntBASIC2.52□□□□□ -2.01
RXRBP28702 RNVU1-2-201ENST00000516326 135 ntBASIC2.52□□□□□ -2.01
RXRBP28702 RNA5SP437-201ENST00000517249 129 ntBASIC2.52□□□□□ -2.01
RXRBP28702 SEPT14P17-201ENST00000617978 177 ntBASIC2.52□□□□□ -2.01
RXRBP28702 AL512310.12-203ENST00000640543 90 ntBASIC2.52□□□□□ -2.01
RXRBP28702 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
RXRBP28702 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
RXRBP28702 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.52□□□□□ -2.01
RXRBP28702 HMGN1P33-201ENST00000432945 451 ntBASIC2.51□□□□□ -2.01
RXRBP28702 SNORD123-201ENST00000459473 70 ntBASIC2.51□□□□□ -2.01
RXRBP28702 RNU6-65P-201ENST00000516332 98 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 1565.7 ms