Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SNORD26-201ENST00000384147 75 ntBASIC1.25□□□□□ -2.21
MSI1O43347 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.25□□□□□ -2.21
MSI1O43347 RNU5E-3P-201ENST00000515913 68 ntBASIC1.25□□□□□ -2.21
MSI1O43347 RNU6-240P-201ENST00000516098 97 ntBASIC1.25□□□□□ -2.21
MSI1O43347 Y_RNA.692-201ENST00000516627 105 ntBASIC1.25□□□□□ -2.21
MSI1O43347 AC011603.4-201ENST00000611325 277 ntBASIC1.25□□□□□ -2.21
MSI1O43347 MIR6516-201ENST00000630554 81 ntBASIC1.25□□□□□ -2.21
MSI1O43347 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
MSI1O43347 RNU6-654P-201ENST00000364373 107 ntBASIC1.24□□□□□ -2.21
MSI1O43347 SNORA1.1-201ENST00000364671 133 ntBASIC1.24□□□□□ -2.21
MSI1O43347 RNU6-690P-201ENST00000365242 106 ntBASIC1.24□□□□□ -2.21
MSI1O43347 RNU6-910P-201ENST00000390844 107 ntBASIC1.24□□□□□ -2.21
MSI1O43347 RNU6-113P-201ENST00000516653 101 ntBASIC1.24□□□□□ -2.21
MSI1O43347 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.24□□□□□ -2.21
MSI1O43347 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.24□□□□□ -2.21
MSI1O43347 Y_RNA.114-201ENST00000363265 113 ntBASIC1.23□□□□□ -2.21
MSI1O43347 RNU1-93P-201ENST00000364704 169 ntBASIC1.23□□□□□ -2.21
MSI1O43347 Y_RNA.430-201ENST00000384081 110 ntBASIC1.23□□□□□ -2.21
MSI1O43347 RNU6-602P-201ENST00000411155 105 ntBASIC1.23□□□□□ -2.21
MSI1O43347 AC244023.1-201ENST00000426884 112 ntBASIC1.23□□□□□ -2.21
MSI1O43347 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.23□□□□□ -2.21
MSI1O43347 RNU11-2P-201ENST00000516898 142 ntBASIC1.23□□□□□ -2.21
MSI1O43347 AC242498.1-201ENST00000604134 111 ntBASIC1.23□□□□□ -2.21
MSI1O43347 MIR6788-201ENST00000618842 66 ntBASIC1.23□□□□□ -2.21
MSI1O43347 TUG1_4.1-201ENST00000619464 181 ntBASIC1.23□□□□□ -2.21
MSI1O43347 Y_RNA.366-201ENST00000365540 102 ntBASIC1.22□□□□□ -2.21
MSI1O43347 RNA5SP95-201ENST00000410319 137 ntBASIC1.22□□□□□ -2.21
MSI1O43347 RNA5SP144-201ENST00000410846 116 ntBASIC1.22□□□□□ -2.21
MSI1O43347 SNORD79.1-201ENST00000516069 84 ntBASIC1.22□□□□□ -2.21
MSI1O43347 RNU6-1258P-201ENST00000516911 111 ntBASIC1.22□□□□□ -2.21
MSI1O43347 RNU6-971P-201ENST00000516920 106 ntBASIC1.22□□□□□ -2.21
MSI1O43347 IGKV1-22-201ENST00000524313 326 ntBASIC1.22□□□□□ -2.21
MSI1O43347 Y_RNA.757-201ENST00000578934 114 ntBASIC1.22□□□□□ -2.21
MSI1O43347 SEPT14P17-201ENST00000617978 177 ntBASIC1.22□□□□□ -2.21
MSI1O43347 SNORA22.1-201ENST00000362701 134 ntBASIC1.21□□□□□ -2.22
MSI1O43347 RNU6-396P-201ENST00000365369 105 ntBASIC1.21□□□□□ -2.22
MSI1O43347 RNA5SP261-201ENST00000410536 106 ntBASIC1.21□□□□□ -2.22
MSI1O43347 RPS3AP1-201ENST00000413190 320 ntBASIC1.21□□□□□ -2.22
MSI1O43347 RNU2-35P-201ENST00000516446 142 ntBASIC1.21□□□□□ -2.22
MSI1O43347 MIR2115-201ENST00000516657 100 ntBASIC1.21□□□□□ -2.22
MSI1O43347 SNORA70.22-201ENST00000517160 124 ntBASIC1.21□□□□□ -2.22
MSI1O43347 AC133485.4-201ENST00000561835 220 ntBASIC1.21□□□□□ -2.22
MSI1O43347 AC138907.4-201ENST00000570107 226 ntBASIC1.21□□□□□ -2.22
MSI1O43347 MIR96-201ENST00000362288 78 ntBASIC1.2□□□□□ -2.22
MSI1O43347 SNORA80D-201ENST00000384488 135 ntBASIC1.2□□□□□ -2.22
MSI1O43347 RNU6-613P-201ENST00000410412 108 ntBASIC1.2□□□□□ -2.22
MSI1O43347 AL158147.1-201ENST00000443970 75 ntBASIC1.2□□□□□ -2.22
MSI1O43347 TMSB4XP3-201ENST00000445144 114 ntBASIC1.2□□□□□ -2.22
MSI1O43347 RNU7-21P-201ENST00000459430 62 ntBASIC1.2□□□□□ -2.22
MSI1O43347 MIR4305-201ENST00000583252 102 ntBASIC1.2□□□□□ -2.22
MSI1O43347 RNU6-235P-201ENST00000362644 107 ntBASIC1.19□□□□□ -2.22
MSI1O43347 Y_RNA.171-201ENST00000363760 102 ntBASIC1.19□□□□□ -2.22
MSI1O43347 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
MSI1O43347 SNORD38B-201ENST00000384690 67 ntBASIC1.19□□□□□ -2.22
MSI1O43347 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
MSI1O43347 SNORD12C-201ENST00000386307 89 ntBASIC1.19□□□□□ -2.22
MSI1O43347 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.19□□□□□ -2.22
MSI1O43347 RPS29P1-201ENST00000465274 159 ntBASIC1.19□□□□□ -2.22
MSI1O43347 RN7SKP179-201ENST00000516126 217 ntBASIC1.19□□□□□ -2.22
MSI1O43347 MIR3152-201ENST00000579801 74 ntBASIC1.19□□□□□ -2.22
MSI1O43347 MIR3910-1-201ENST00000580936 111 ntBASIC1.19□□□□□ -2.22
MSI1O43347 AC021443.1-201ENST00000604478 211 ntBASIC1.19□□□□□ -2.22
MSI1O43347 AL137067.1-201ENST00000615933 120 ntBASIC1.19□□□□□ -2.22
MSI1O43347 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.19□□□□□ -2.22
MSI1O43347 SNORD38B-202ENST00000625943 69 ntBASIC1.19□□□□□ -2.22
MSI1O43347 Y_RNA.218-201ENST00000364218 104 ntBASIC1.18□□□□□ -2.22
MSI1O43347 Y_RNA.330-201ENST00000365230 109 ntBASIC1.18□□□□□ -2.22
MSI1O43347 MT-TN-201ENST00000387400 73 ntBASIC1.18□□□□□ -2.22
MSI1O43347 RNU6-205P-201ENST00000390858 107 ntBASIC1.18□□□□□ -2.22
MSI1O43347 AL591704.2-201ENST00000421658 181 ntBASIC1.18□□□□□ -2.22
MSI1O43347 RNU6-1211P-201ENST00000459179 105 ntBASIC1.18□□□□□ -2.22
MSI1O43347 RNU7-123P-201ENST00000515911 60 ntBASIC1.18□□□□□ -2.22
MSI1O43347 MIR4264-201ENST00000583520 66 ntBASIC1.18□□□□□ -2.22
MSI1O43347 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
MSI1O43347 MIR377-201ENST00000362145 69 ntBASIC1.17□□□□□ -2.22
MSI1O43347 RNU6-647P-201ENST00000364243 107 ntBASIC1.17□□□□□ -2.22
MSI1O43347 RNU6-81P-201ENST00000365608 104 ntBASIC1.17□□□□□ -2.22
MSI1O43347 MIR222-201ENST00000384992 110 ntBASIC1.17□□□□□ -2.22
MSI1O43347 MIR548J-201ENST00000408833 112 ntBASIC1.17□□□□□ -2.22
MSI1O43347 Y_RNA.617-201ENST00000410920 90 ntBASIC1.17□□□□□ -2.22
MSI1O43347 AL512326.2-201ENST00000426359 151 ntBASIC1.17□□□□□ -2.22
MSI1O43347 RNU7-164P-201ENST00000459221 62 ntBASIC1.17□□□□□ -2.22
MSI1O43347 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.17□□□□□ -2.22
MSI1O43347 MIR6740-201ENST00000618268 113 ntBASIC1.17□□□□□ -2.22
MSI1O43347 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
MSI1O43347 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
MSI1O43347 MIR26B-201ENST00000362251 77 ntBASIC1.16□□□□□ -2.22
MSI1O43347 Y_RNA.298-201ENST00000364960 107 ntBASIC1.16□□□□□ -2.22
MSI1O43347 MIR539-201ENST00000365690 78 ntBASIC1.16□□□□□ -2.22
MSI1O43347 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
MSI1O43347 SNORD12-201ENST00000391002 90 ntBASIC1.16□□□□□ -2.22
MSI1O43347 AL022718.1-201ENST00000412004 84 ntBASIC1.16□□□□□ -2.22
MSI1O43347 RN7SKP19-201ENST00000516016 252 ntBASIC1.16□□□□□ -2.22
MSI1O43347 RNU6-781P-201ENST00000516377 101 ntBASIC1.16□□□□□ -2.22
MSI1O43347 RNY4P20-201ENST00000516678 93 ntBASIC1.16□□□□□ -2.22
MSI1O43347 AC036111.3-201ENST00000526389 112 ntBASIC1.16□□□□□ -2.22
MSI1O43347 AC019288.1-201ENST00000557918 224 ntBASIC1.16□□□□□ -2.22
MSI1O43347 RN7SL793P-201ENST00000583259 296 ntBASIC1.16□□□□□ -2.22
MSI1O43347 AP000753.3-201ENST00000604083 169 ntBASIC1.16□□□□□ -2.22
MSI1O43347 uc_338.6-201ENST00000613544 171 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 328.8 ms