Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 Y_RNA.10-201ENST00000362371 110 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 RNU4-67P-201ENST00000364569 141 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.342-201ENST00000365352 113 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.360-201ENST00000365512 102 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.430-201ENST00000384081 110 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-409P-201ENST00000384114 104 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 SNORD28B-201ENST00000390993 75 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 SNORA48.3-201ENST00000391081 134 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.601-201ENST00000410500 113 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 RNU6-733P-201ENST00000410759 104 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 RPS3AP1-201ENST00000413190 320 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 RNA5SP182-201ENST00000516064 82 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 MIR548AR-201ENST00000582191 57 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 AC243994.1-201ENST00000618627 109 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 SNORD3E-202ENST00000627253 216 ntBASIC2.29□□□□□ -2.04
PCDHA11Q9Y5I1 Y_RNA.470-201ENST00000384307 117 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 MIR577-201ENST00000385196 96 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 RNA5SP100-201ENST00000410903 110 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 RNA5SP59-201ENST00000410922 110 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 AL020996.3-201ENST00000606617 222 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 MIR4791-201ENST00000607666 84 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 MIR6717-201ENST00000622747 73 ntBASIC2.28□□□□□ -2.04
PCDHA11Q9Y5I1 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 MIR424-201ENST00000362227 98 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-832P-201ENST00000363319 107 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 Y_RNA.388-201ENST00000383919 113 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-913P-201ENST00000390913 95 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 SNORD77B-201ENST00000391112 67 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 RNA5SP212-201ENST00000391223 107 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-1190P-201ENST00000410811 104 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 RNA5SP57-201ENST00000459463 123 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 RNA5SP33-201ENST00000516687 98 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 MIR548AE2-201ENST00000583456 67 ntBASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
PCDHA11Q9Y5I1 MIR144-201ENST00000384886 86 ntBASIC2.26□□□□□ -2.05
PCDHA11Q9Y5I1 MIR605-201ENST00000385078 83 ntBASIC2.26□□□□□ -2.05
PCDHA11Q9Y5I1 AL353813.1-201ENST00000440700 253 ntBASIC2.26□□□□□ -2.05
PCDHA11Q9Y5I1 MIR1270-201ENST00000459320 83 ntBASIC2.26□□□□□ -2.05
PCDHA11Q9Y5I1 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.26□□□□□ -2.05
PCDHA11Q9Y5I1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.25□□□□□ -2.05
PCDHA11Q9Y5I1 MIR337-201ENST00000362281 93 ntBASIC2.25□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-616P-201ENST00000384353 107 ntBASIC2.25□□□□□ -2.05
PCDHA11Q9Y5I1 Y_RNA.508-201ENST00000384502 114 ntBASIC2.25□□□□□ -2.05
PCDHA11Q9Y5I1 Y_RNA.537-201ENST00000384626 109 ntBASIC2.25□□□□□ -2.05
PCDHA11Q9Y5I1 AC096949.1-201ENST00000412047 152 ntBASIC2.25□□□□□ -2.05
PCDHA11Q9Y5I1 MIR378A-201ENST00000362177 66 ntBASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-679P-201ENST00000391003 106 ntBASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 SNORA17.3-201ENST00000391159 129 ntBASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 SNORA40.18-201ENST00000391200 128 ntBASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 FAM106DP-201ENST00000586416 501 ntBASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 AC062037.1-201ENST00000605302 128 ntBASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.24□□□□□ -2.05
PCDHA11Q9Y5I1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 Y_RNA.118-201ENST00000363300 101 ntBASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 SNORA16B-201ENST00000364674 135 ntBASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-1067P-201ENST00000384752 107 ntBASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 SNORA7.5-201ENST00000410672 110 ntBASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 AC004941.2-201ENST00000427009 228 ntBASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 RPL23AP6-201ENST00000446637 472 ntBASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 SNORA74.3-201ENST00000517108 154 ntBASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
PCDHA11Q9Y5I1 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-170P-201ENST00000362832 104 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-457P-201ENST00000363999 107 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 Y_RNA.377-201ENST00000365644 108 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-321P-201ENST00000410912 106 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 snoU13.16-201ENST00000459350 104 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 RNU6-1018P-201ENST00000516577 106 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 AC026421.1-201ENST00000519101 163 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 MIR5002-201ENST00000584713 97 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 AC012531.4-201ENST00000616509 177 ntBASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
PCDHA11Q9Y5I1 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.21□□□□□ -2.05
PCDHA11Q9Y5I1 RNA5SP276-201ENST00000362580 94 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 Y_RNA.290-201ENST00000364879 114 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-1201P-201ENST00000384227 107 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-360P-201ENST00000390944 104 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 RNU7-61P-201ENST00000515897 61 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 RNU6-795P-201ENST00000516323 103 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 MIR6895-201ENST00000613497 78 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 AL773524.1-201ENST00000614065 229 ntBASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.06
PCDHA11Q9Y5I1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 SNORA32-201ENST00000384072 121 ntBASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 MIR450A2-201ENST00000385022 100 ntBASIC2.2□□□□□ -2.06
PCDHA11Q9Y5I1 HMGN1P33-201ENST00000432945 451 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms