Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 SNORD115-43-201ENST00000365503 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-36-201ENST00000365629 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 MIR136-201ENST00000385207 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD28B-201ENST00000390993 75 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORA40.5-201ENST00000391061 128 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 RNU7-107P-201ENST00000459121 61 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 snoU13.18-201ENST00000459483 104 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 RNU6-1333P-201ENST00000516162 93 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 SNORD115-40-201ENST00000606510 82 ntBASIC1.3□□□□□ -2.2
DDX43Q9NXZ2 RNU6-349P-201ENST00000362402 107 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 RNU6-235P-201ENST00000362644 107 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 SNORA2.2-201ENST00000365473 135 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 SNORA24-201ENST00000384096 131 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.563-201ENST00000384707 108 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 MIRLET7F2-201ENST00000385277 83 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 AC008267.6-201ENST00000441664 139 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 SNORD123-201ENST00000459473 70 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.712-201ENST00000517011 92 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 MIR548AR-201ENST00000582191 57 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 AL513534.2-201ENST00000603836 250 ntBASIC1.29□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.191-201ENST00000363972 113 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 SNORA27-201ENST00000384323 126 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 RNU6-1154P-201ENST00000391001 104 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 RNU6-998P-201ENST00000515894 101 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 RNU6-62P-201ENST00000516526 102 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 SNORA74.3-201ENST00000517108 154 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 AC090821.2-201ENST00000523552 176 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.757-201ENST00000578934 114 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 SNORA4-201ENST00000584302 138 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 AC106754.2-201ENST00000623006 233 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 AC091932.4-201ENST00000623386 200 ntBASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
DDX43Q9NXZ2 Y_RNA.241-201ENST00000364470 117 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 SNORD18B-201ENST00000365659 72 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 MIR618-201ENST00000385287 98 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 SNORD41-201ENST00000386967 70 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 Y_RNA.630-201ENST00000411370 108 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 MTATP6P21-201ENST00000440681 189 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 RNU6-772P-201ENST00000516042 105 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 RN7SKP179-201ENST00000516126 217 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 RNU6-313P-201ENST00000516317 112 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 RNU6-781P-201ENST00000516377 101 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 RNU6-113P-201ENST00000516653 101 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 RNA5SP102-201ENST00000516865 106 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 SNORA18.7-201ENST00000516910 131 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 RNU6-165P-201ENST00000517170 99 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 MIR4452-201ENST00000583004 71 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
DDX43Q9NXZ2 SNORD58C-201ENST00000365223 64 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 RNU6-1081P-201ENST00000384537 107 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 RPS29P24-201ENST00000486345 171 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 RNU7-40P-201ENST00000516397 64 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 AC090049.2-201ENST00000550377 109 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 MIR3914-2-201ENST00000637339 95 ntBASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.26□□□□□ -2.21
DDX43Q9NXZ2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 RNU6-1290P-201ENST00000362957 109 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 RNU6-647P-201ENST00000364243 107 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 Y_RNA.351-201ENST00000365436 96 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 Y_RNA.366-201ENST00000365540 102 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 Y_RNA.370-201ENST00000365589 108 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 MIR489-201ENST00000384923 84 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 RNU6-735P-201ENST00000410612 107 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 RNU7-96P-201ENST00000459535 64 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 AL133373.1-201ENST00000497098 94 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 RN7SKP19-201ENST00000516016 252 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 HSPE1P19-201ENST00000603327 295 ntBASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.25□□□□□ -2.21
DDX43Q9NXZ2 Y_RNA.353-201ENST00000365440 108 ntBASIC1.24□□□□□ -2.21
DDX43Q9NXZ2 MIR570-201ENST00000384917 97 ntBASIC1.24□□□□□ -2.21
DDX43Q9NXZ2 RNU6-240P-201ENST00000516098 97 ntBASIC1.24□□□□□ -2.21
DDX43Q9NXZ2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.24□□□□□ -2.21
DDX43Q9NXZ2 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 RNU1-133P-201ENST00000364867 167 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 SNORA1.2-201ENST00000365189 134 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 RNY1P6-201ENST00000384193 109 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 RNU6-913P-201ENST00000390913 95 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 SNORA26.6-201ENST00000391256 115 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 snoU13.25-201ENST00000458945 104 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 RNU7-80P-201ENST00000459562 61 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 MIR4764-201ENST00000580680 88 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 MIR4791-201ENST00000607666 84 ntBASIC1.23□□□□□ -2.21
DDX43Q9NXZ2 RNU6-42P-201ENST00000384165 107 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 RNU7-73P-201ENST00000458743 63 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 RNU2-11P-201ENST00000459191 187 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 RNU5E-3P-201ENST00000515913 68 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 RNU7-43P-201ENST00000516554 64 ntBASIC1.22□□□□□ -2.21
DDX43Q9NXZ2 MIR548AI-201ENST00000579940 88 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 249.6 ms