Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RNU6-580P-201ENST00000365159 107 ntBASIC5.46□□□□□ -1.54
SENP3Q9H4L4 Y_RNA.325-201ENST00000365171 122 ntBASIC5.46□□□□□ -1.54
SENP3Q9H4L4 AL513328.1-201ENST00000446460 224 ntBASIC5.46□□□□□ -1.54
SENP3Q9H4L4 AC244505.6-201ENST00000452829 130 ntBASIC5.46□□□□□ -1.54
SENP3Q9H4L4 AC067940.1-201ENST00000458411 300 ntBASIC5.46□□□□□ -1.54
SENP3Q9H4L4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.46□□□□□ -1.54
SENP3Q9H4L4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
SENP3Q9H4L4 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SENP3Q9H4L4 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SENP3Q9H4L4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SENP3Q9H4L4 RNA5SP208-201ENST00000516156 78 ntBASIC5.45□□□□□ -1.54
SENP3Q9H4L4 MIR3616-201ENST00000584070 92 ntBASIC5.45□□□□□ -1.54
SENP3Q9H4L4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.45□□□□□ -1.54
SENP3Q9H4L4 MAPK10-322ENST00000641485 4530 ntBASIC5.45□□□□□ -1.54
SENP3Q9H4L4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.45□□□□□ -1.54
SENP3Q9H4L4 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SENP3Q9H4L4 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SENP3Q9H4L4 RNU6-810P-201ENST00000364001 107 ntBASIC5.44□□□□□ -1.54
SENP3Q9H4L4 Y_RNA.246-201ENST00000364495 108 ntBASIC5.44□□□□□ -1.54
SENP3Q9H4L4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SENP3Q9H4L4 RNU6-513P-201ENST00000516104 104 ntBASIC5.44□□□□□ -1.54
SENP3Q9H4L4 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SENP3Q9H4L4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SENP3Q9H4L4 RNU6-922P-201ENST00000516753 99 ntBASIC5.43□□□□□ -1.54
SENP3Q9H4L4 AL591424.2-201ENST00000617023 128 ntBASIC5.43□□□□□ -1.54
SENP3Q9H4L4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SENP3Q9H4L4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SENP3Q9H4L4 AL353746.1-201ENST00000566293 6881 ntBASIC5.42□□□□□ -1.54
SENP3Q9H4L4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
SENP3Q9H4L4 RNU6-203P-201ENST00000384038 104 ntBASIC5.42□□□□□ -1.54
SENP3Q9H4L4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.42□□□□□ -1.54
SENP3Q9H4L4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SENP3Q9H4L4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SENP3Q9H4L4 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SENP3Q9H4L4 MIR617-201ENST00000385030 97 ntBASIC5.41□□□□□ -1.54
SENP3Q9H4L4 AC005326.1-201ENST00000429197 123 ntBASIC5.41□□□□□ -1.54
SENP3Q9H4L4 snoU13.13-201ENST00000458842 104 ntBASIC5.41□□□□□ -1.54
SENP3Q9H4L4 MIR3126-201ENST00000577443 74 ntBASIC5.41□□□□□ -1.54
SENP3Q9H4L4 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC5.41□□□□□ -1.54
SENP3Q9H4L4 AC008011.1-201ENST00000545989 227 ntBASIC5.4□□□□□ -1.54
SENP3Q9H4L4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC5.4□□□□□ -1.54
SENP3Q9H4L4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC5.4□□□□□ -1.54
SENP3Q9H4L4 MIR5187-201ENST00000583479 76 ntBASIC5.4□□□□□ -1.54
SENP3Q9H4L4 AC008608.1-201ENST00000603910 127 ntBASIC5.4□□□□□ -1.54
SENP3Q9H4L4 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC5.4□□□□□ -1.55
SENP3Q9H4L4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
SENP3Q9H4L4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
SENP3Q9H4L4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SENP3Q9H4L4 RNA5SP465-201ENST00000391195 109 ntBASIC5.39□□□□□ -1.55
SENP3Q9H4L4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SENP3Q9H4L4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SENP3Q9H4L4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SENP3Q9H4L4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SENP3Q9H4L4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SENP3Q9H4L4 RN7SKP46-201ENST00000515942 234 ntBASIC5.38□□□□□ -1.55
SENP3Q9H4L4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.38□□□□□ -1.55
SENP3Q9H4L4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.38□□□□□ -1.55
SENP3Q9H4L4 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
SENP3Q9H4L4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SENP3Q9H4L4 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SENP3Q9H4L4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SENP3Q9H4L4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SENP3Q9H4L4 RNA5SP501-201ENST00000410990 112 ntBASIC5.37□□□□□ -1.55
SENP3Q9H4L4 snoU13.21-201ENST00000459368 105 ntBASIC5.37□□□□□ -1.55
SENP3Q9H4L4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC5.37□□□□□ -1.55
SENP3Q9H4L4 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.37□□□□□ -1.55
SENP3Q9H4L4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SENP3Q9H4L4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC5.37□□□□□ -1.55
SENP3Q9H4L4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 snoU13.25-201ENST00000458945 104 ntBASIC5.36□□□□□ -1.55
SENP3Q9H4L4 RNU7-74P-201ENST00000459104 62 ntBASIC5.36□□□□□ -1.55
SENP3Q9H4L4 RNU6-419P-201ENST00000517030 63 ntBASIC5.36□□□□□ -1.55
SENP3Q9H4L4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 MIR7702-201ENST00000621931 59 ntBASIC5.36□□□□□ -1.55
SENP3Q9H4L4 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SENP3Q9H4L4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.35□□□□□ -1.55
SENP3Q9H4L4 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC5.35□□□□□ -1.55
SENP3Q9H4L4 MIR449A-201ENST00000362113 91 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 SNORA9.1-201ENST00000362412 131 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 SNORD21-201ENST00000383953 95 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 MIR1185-1-201ENST00000408598 86 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 AC004965.1-201ENST00000413033 213 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 AC083863.1-201ENST00000438811 231 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 RN7SL442P-201ENST00000473804 320 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 AC006272.2-201ENST00000594725 163 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SENP3Q9H4L4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC5.35□□□□□ -1.55
SENP3Q9H4L4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SENP3Q9H4L4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC5.35□□□□□ -1.55
SENP3Q9H4L4 ZNF658B-202ENST00000615961 3375 ntBASIC5.35□□□□□ -1.55
SENP3Q9H4L4 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SENP3Q9H4L4 RNA5SP374-201ENST00000362939 125 ntBASIC5.34□□□□□ -1.55
SENP3Q9H4L4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SENP3Q9H4L4 RNA5SP293-201ENST00000410527 113 ntBASIC5.34□□□□□ -1.55
SENP3Q9H4L4 AC104332.2-201ENST00000429959 156 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms