Protein–RNA interactions for Protein: Q9H0W5

CCDC8, Coiled-coil domain-containing protein 8, humanhuman

Predicted RBP Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8Q9H0W5 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 RNU6-613P-201ENST00000410412 108 ntBASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 RNU7-90P-201ENST00000459216 62 ntBASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 RNA5SP102-201ENST00000516865 106 ntBASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 MIR548X2-201ENST00000579776 100 ntBASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 MIR3658-201ENST00000636291 56 ntBASIC1.49□□□□□ -2.17
CCDC8Q9H0W5 MIR377-201ENST00000362145 69 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 SNORA1.1-201ENST00000364671 133 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 SNORA25.8-201ENST00000364831 128 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 RNU4-11P-201ENST00000365287 132 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 RNY1P5-201ENST00000383890 115 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 Y_RNA.398-201ENST00000383952 99 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 SNORD38B-201ENST00000384690 67 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 MRPL35P3-201ENST00000421557 364 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 RNA5SP236-201ENST00000516169 116 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 AC027335.2-201ENST00000624030 375 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 SNORD38B-202ENST00000625943 69 ntBASIC1.48□□□□□ -2.17
CCDC8Q9H0W5 RNU6-1130P-201ENST00000365434 107 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 Y_RNA.363-201ENST00000365529 113 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 MIR19B1-201ENST00000384829 87 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 MIR618-201ENST00000385287 98 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 AL603914.1-201ENST00000401964 204 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 MIR4452-201ENST00000583004 71 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 MIR4264-201ENST00000583520 66 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 AP000753.3-201ENST00000604083 169 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 AL596211.1-201ENST00000569873 2277 ntBASIC1.47□□□□□ -2.17
CCDC8Q9H0W5 MIR342-201ENST00000362212 99 ntBASIC1.46□□□□□ -2.18
CCDC8Q9H0W5 RNU6-1336P-201ENST00000383886 109 ntBASIC1.46□□□□□ -2.18
CCDC8Q9H0W5 SNORA20-201ENST00000384662 132 ntBASIC1.46□□□□□ -2.18
CCDC8Q9H0W5 RPS3AP1-201ENST00000413190 320 ntBASIC1.46□□□□□ -2.18
CCDC8Q9H0W5 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.46□□□□□ -2.18
CCDC8Q9H0W5 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.46□□□□□ -2.18
CCDC8Q9H0W5 MIR6717-201ENST00000622747 73 ntBASIC1.46□□□□□ -2.18
CCDC8Q9H0W5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 Y_RNA.215-201ENST00000364204 112 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 MIR222-201ENST00000384992 110 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 RNU7-197P-201ENST00000458836 62 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 RNU7-200P-201ENST00000516105 62 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 SNORA4-201ENST00000584302 138 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 AP001340.1-201ENST00000624405 217 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 AC091895.1-201ENST00000624494 256 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 MIR6516-201ENST00000630554 81 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 AC021753.1-201ENST00000635724 168 ntBASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC8Q9H0W5 MIR26B-201ENST00000362251 77 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 Y_RNA.8-201ENST00000362353 102 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 RNU1-124P-201ENST00000363861 145 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 RNY1P6-201ENST00000384193 109 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 MIR489-201ENST00000384923 84 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 SNORA75.2-201ENST00000391138 150 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 SNORA75.3-201ENST00000391231 150 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 SNORA26.6-201ENST00000391256 115 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 SNORD111-201ENST00000408139 94 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 AC063976.4-201ENST00000421971 163 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 AC019288.1-201ENST00000557918 224 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 AC021613.1-201ENST00000623880 111 ntBASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC8Q9H0W5 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC8Q9H0W5 Y_RNA.168-201ENST00000363740 102 ntBASIC1.43□□□□□ -2.18
CCDC8Q9H0W5 Y_RNA.170-201ENST00000363746 110 ntBASIC1.43□□□□□ -2.18
CCDC8Q9H0W5 RNU6-580P-201ENST00000365159 107 ntBASIC1.43□□□□□ -2.18
CCDC8Q9H0W5 RNU6-1062P-201ENST00000383908 107 ntBASIC1.43□□□□□ -2.18
CCDC8Q9H0W5 RPS23P4-201ENST00000487908 423 ntBASIC1.43□□□□□ -2.18
CCDC8Q9H0W5 SNORD113.3-201ENST00000364630 78 ntBASIC1.42□□□□□ -2.18
CCDC8Q9H0W5 Y_RNA.488-201ENST00000384403 102 ntBASIC1.42□□□□□ -2.18
CCDC8Q9H0W5 AC002429.1-201ENST00000437672 148 ntBASIC1.42□□□□□ -2.18
CCDC8Q9H0W5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC8Q9H0W5 RNU6-349P-201ENST00000362402 107 ntBASIC1.41□□□□□ -2.18
CCDC8Q9H0W5 MIR200A-201ENST00000384875 90 ntBASIC1.41□□□□□ -2.18
CCDC8Q9H0W5 MT-TR-201ENST00000387439 65 ntBASIC1.41□□□□□ -2.18
CCDC8Q9H0W5 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
CCDC8Q9H0W5 RNU6-602P-201ENST00000411155 105 ntBASIC1.41□□□□□ -2.18
CCDC8Q9H0W5 AC106800.4-201ENST00000614905 153 ntBASIC1.41□□□□□ -2.18
CCDC8Q9H0W5 Y_RNA.343-201ENST00000365354 112 ntBASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 RNU6-42P-201ENST00000384165 107 ntBASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 RNA5SP220-201ENST00000516298 104 ntBASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 RNU6-255P-201ENST00000516957 105 ntBASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 RNA5SP404-201ENST00000517118 132 ntBASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 MTND5P41-201ENST00000517498 206 ntBASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 MIR6841-201ENST00000637129 72 ntBASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
CCDC8Q9H0W5 Y_RNA.330-201ENST00000365230 109 ntBASIC1.39□□□□□ -2.19
CCDC8Q9H0W5 RNU6-125P-201ENST00000384505 107 ntBASIC1.39□□□□□ -2.19
CCDC8Q9H0W5 Y_RNA.690-201ENST00000516603 95 ntBASIC1.39□□□□□ -2.19
CCDC8Q9H0W5 Y_RNA.692-201ENST00000516627 105 ntBASIC1.39□□□□□ -2.19
CCDC8Q9H0W5 RNU2-60P-201ENST00000517290 128 ntBASIC1.39□□□□□ -2.19
CCDC8Q9H0W5 AC008163.1-202ENST00000636004 2889 ntBASIC1.39□□□□□ -2.19
CCDC8Q9H0W5 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
CCDC8Q9H0W5 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
CCDC8Q9H0W5 MIR569-201ENST00000385228 96 ntBASIC1.38□□□□□ -2.19
CCDC8Q9H0W5 AC244023.1-201ENST00000426884 112 ntBASIC1.38□□□□□ -2.19
CCDC8Q9H0W5 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
CCDC8Q9H0W5 AL078603.1-201ENST00000603824 313 ntBASIC1.38□□□□□ -2.19
CCDC8Q9H0W5 AC242498.1-201ENST00000604134 111 ntBASIC1.38□□□□□ -2.19
CCDC8Q9H0W5 AC090844.1-201ENST00000422019 156 ntBASIC1.37□□□□□ -2.19
CCDC8Q9H0W5 HMGN1P33-201ENST00000432945 451 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms